G22781


Basic Information

Item Value
gene id G22781
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 11897543 ~ 11898137 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU28572
atatgataacacacaaatcgttaaacaaaaaaaggttataaacacattgactacaataccagttagtaagacgaaggtgagtctctcattagtattgttagtcggacatcaaataactacgcaggttagtatttatgtcaggtaacttctcgttatatatatatcagtctcatttacgtttaggtgctgAGAaggatcctatcattacttgttaccacaatttcccttaactgattattattcaatgattaaggataggcagggccaccaataatctaatgtctattaacgtgtgtcaatttcagactaaacaattaaacaggaatgagaagatatttctcggcgttgacaggttttatttctaaagttgtcaacaaaacagtttaatgcaacacacatttatatttaagcaaaactaaatgatattacacattctagagttatgaatcacagattaacatttctaattgataaCAGCACatggcacgaggtccgtgtggtttggaacaaaggcagtccggttcagctttgtccaagaacttccactcagtcgatgcacctggaagttggggtttcgcgaaacagtcttttccaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28572 True 595 lncRNA 0.35 1 11897543 11898137

Neighbor

gene id symbol gene type direction distance location
AMCG00007311 NA coding upstream 293825 11588634 ~ 11603718 (+)
AMCG00007310 NA coding upstream 1119836 10758834 ~ 10777707 (+)
AMCG00007306 rag1 coding upstream 1153868 10739045 ~ 10743675 (+)
AMCG00007305 NA coding upstream 1230248 10660181 ~ 10667295 (+)
AMCG00007308 NA coding upstream 1242554 10628350 ~ 10654989 (+)
AMCG00007317 NA coding downstream 1643619 13541756 ~ 13551121 (+)
AMCG00007321 mrpl21,LOC106561938 coding downstream 1725007 13623144 ~ 13624807 (+)
AMCG00007322 NA coding downstream 1748490 13646627 ~ 13647013 (+)
AMCG00007328 NA coding downstream 2077168 13975305 ~ 13981853 (+)
AMCG00007327 NA coding downstream 2151256 14049393 ~ 14064082 (+)
G22775 NA non-coding upstream 17937 11879400 ~ 11879606 (+)
G22773 NA non-coding upstream 19681 11877505 ~ 11877862 (+)
G22770 NA non-coding upstream 31059 11866163 ~ 11866484 (+)
G22769 NA non-coding upstream 31519 11865436 ~ 11866024 (+)
G22760 NA non-coding upstream 84450 11812865 ~ 11813093 (+)
G22816 NA non-coding downstream 1054738 12952875 ~ 12953096 (+)
G22837 NA non-coding downstream 1453489 13351626 ~ 13351919 (+)
G22839 NA non-coding downstream 1455476 13353613 ~ 13354456 (+)
G22844 NA non-coding downstream 1585358 13483495 ~ 13492334 (+)
G22887 NA non-coding downstream 1733409 13631546 ~ 13631960 (+)
AMCG00007307 clg19h11orf96 other upstream 1284439 10611196 ~ 10613104 (+)
AMCG00007278 NA other upstream 1932276 9936920 ~ 9965267 (+)
G22372 NA other upstream 2397815 9436524 ~ 9499728 (+)
AMCG00007253 calcb,LOC106584617,LOC104951332,LOC107090894,LOC106922915,LOC106950942,LOC103461098 other upstream 3186232 8697983 ~ 8711311 (+)
AMCG00007242 NA other upstream 3445961 8431102 ~ 8451582 (+)
AMCG00007337 NA other downstream 2580536 14478673 ~ 14489692 (+)
AMCG00007352 NA other downstream 3378574 15276711 ~ 15287960 (+)
AMCG00007350 tsg101 other downstream 3468524 15366661 ~ 15379965 (+)
AMCG00007379 NA other downstream 4726253 16624390 ~ 16662700 (+)
AMCG00007417 NA other downstream 6300481 18198618 ~ 18201960 (+)

Expression


Co-expression Network