G22839


Basic Information

Item Value
gene id G22839
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 13353613 ~ 13354456 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU28634
GGCTGTAGTAGTCTAcgtttgaaagtgaaagtaacctGGCTGCAGCGCCCAGACTAACCTAGGGTATTAACTTATGTTTATACATGTCTCCGTTTAAGACACGAAAGTGATGATGAGCTTGAATCAGGAACGCCAGATCTAAGAAGACGTCTGCATTTAAACGGTTCATCGGGATCTATTTCAGACAGTTCATTACTGCAGCTGATTACACAGCAAGGTAGCCCCAGTTATTCACCAACAACACCCCAAGAAACCGCCCGGGTGTCTCCGCAAGTTAGGAGCCATGACTCCCCGACGCATATCCAAACATCGCCTGGACCGCCTGCATCACCAGCCAGCATCGTATCGAATGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28634 True 355 lncRNA 0.48 2 13353613 13354456

Neighbor

gene id symbol gene type direction distance location
AMCG00007311 NA coding upstream 1749895 11588634 ~ 11603718 (+)
AMCG00007310 NA coding upstream 2575906 10758834 ~ 10777707 (+)
AMCG00007306 rag1 coding upstream 2609938 10739045 ~ 10743675 (+)
AMCG00007305 NA coding upstream 2686318 10660181 ~ 10667295 (+)
AMCG00007308 NA coding upstream 2698624 10628350 ~ 10654989 (+)
AMCG00007317 NA coding downstream 187300 13541756 ~ 13551121 (+)
AMCG00007321 mrpl21,LOC106561938 coding downstream 268688 13623144 ~ 13624807 (+)
AMCG00007322 NA coding downstream 292171 13646627 ~ 13647013 (+)
AMCG00007328 NA coding downstream 620849 13975305 ~ 13981853 (+)
AMCG00007327 NA coding downstream 694937 14049393 ~ 14064082 (+)
G22837 NA non-coding upstream 1694 13351626 ~ 13351919 (+)
G22816 NA non-coding upstream 400517 12952875 ~ 12953096 (+)
G22781 NA non-coding upstream 1455476 11897543 ~ 11898137 (+)
G22775 NA non-coding upstream 1474007 11879400 ~ 11879606 (+)
G22773 NA non-coding upstream 1475751 11877505 ~ 11877862 (+)
G22844 NA non-coding downstream 129039 13483495 ~ 13492334 (+)
G22887 NA non-coding downstream 277090 13631546 ~ 13631960 (+)
G22888 NA non-coding downstream 282968 13637424 ~ 13637624 (+)
G22893 NA non-coding downstream 322501 13676957 ~ 13677701 (+)
G22930 LOC100846954 non-coding downstream 591182 13945638 ~ 13946065 (+)
AMCG00007307 clg19h11orf96 other upstream 2740509 10611196 ~ 10613104 (+)
AMCG00007278 NA other upstream 3388346 9936920 ~ 9965267 (+)
G22372 NA other upstream 3853885 9436524 ~ 9499728 (+)
AMCG00007253 calcb,LOC106584617,LOC104951332,LOC107090894,LOC106922915,LOC106950942,LOC103461098 other upstream 4642302 8697983 ~ 8711311 (+)
AMCG00007242 NA other upstream 4902031 8431102 ~ 8451582 (+)
AMCG00007337 NA other downstream 1124217 14478673 ~ 14489692 (+)
AMCG00007352 NA other downstream 1922255 15276711 ~ 15287960 (+)
AMCG00007350 tsg101 other downstream 2012205 15366661 ~ 15379965 (+)
AMCG00007379 NA other downstream 3269934 16624390 ~ 16662700 (+)
AMCG00007417 NA other downstream 4844162 18198618 ~ 18201960 (+)

Expression


Co-expression Network