Gene
RNA
| Item | Value |
|---|---|
| gene id | G22888 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 13637424 ~ 13637624 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0072329 | monocarboxylic acid catabolic process | biological_process |
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0009062 | fatty acid catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU28695 | True | 201 | lncRNA | 0.40 | 1 | 13637424 | 13637624 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00007321 | mrpl21,LOC106561938 | coding | upstream | 12617 | 13623144 ~ 13624807 (+) |
| AMCG00007317 | NA | coding | upstream | 86303 | 13541756 ~ 13551121 (+) |
| AMCG00007311 | NA | coding | upstream | 2033706 | 11588634 ~ 11603718 (+) |
| AMCG00007310 | NA | coding | upstream | 2859717 | 10758834 ~ 10777707 (+) |
| AMCG00007306 | rag1 | coding | upstream | 2893749 | 10739045 ~ 10743675 (+) |
| AMCG00007322 | NA | coding | downstream | 9003 | 13646627 ~ 13647013 (+) |
| AMCG00007328 | NA | coding | downstream | 337681 | 13975305 ~ 13981853 (+) |
| AMCG00007327 | NA | coding | downstream | 411769 | 14049393 ~ 14064082 (+) |
| AMCG00007329 | slc1a2,LOC107570361 | coding | downstream | 520560 | 14158184 ~ 14185574 (+) |
| AMCG00007332 | apip | coding | downstream | 728084 | 14365708 ~ 14383919 (+) |
| G22887 | NA | non-coding | upstream | 5464 | 13631546 ~ 13631960 (+) |
| G22844 | NA | non-coding | upstream | 145090 | 13483495 ~ 13492334 (+) |
| G22839 | NA | non-coding | upstream | 282968 | 13353613 ~ 13354456 (+) |
| G22837 | NA | non-coding | upstream | 285505 | 13351626 ~ 13351919 (+) |
| G22816 | NA | non-coding | upstream | 684328 | 12952875 ~ 12953096 (+) |
| G22893 | NA | non-coding | downstream | 39333 | 13676957 ~ 13677701 (+) |
| G22930 | LOC100846954 | non-coding | downstream | 308014 | 13945638 ~ 13946065 (+) |
| G22932 | NA | non-coding | downstream | 384467 | 14022091 ~ 14022317 (+) |
| G22935 | NA | non-coding | downstream | 403168 | 14040792 ~ 14041060 (+) |
| G22940 | NA | non-coding | downstream | 427326 | 14064950 ~ 14065208 (+) |
| AMCG00007307 | clg19h11orf96 | other | upstream | 3024320 | 10611196 ~ 10613104 (+) |
| AMCG00007278 | NA | other | upstream | 3672157 | 9936920 ~ 9965267 (+) |
| G22372 | NA | other | upstream | 4137696 | 9436524 ~ 9499728 (+) |
| AMCG00007253 | calcb,LOC106584617,LOC104951332,LOC107090894,LOC106922915,LOC106950942,LOC103461098 | other | upstream | 4926113 | 8697983 ~ 8711311 (+) |
| AMCG00007242 | NA | other | upstream | 5185842 | 8431102 ~ 8451582 (+) |
| AMCG00007337 | NA | other | downstream | 841049 | 14478673 ~ 14489692 (+) |
| AMCG00007352 | NA | other | downstream | 1639087 | 15276711 ~ 15287960 (+) |
| AMCG00007350 | tsg101 | other | downstream | 1729037 | 15366661 ~ 15379965 (+) |
| AMCG00007379 | NA | other | downstream | 2986766 | 16624390 ~ 16662700 (+) |
| AMCG00007417 | NA | other | downstream | 4560994 | 18198618 ~ 18201960 (+) |
