G29973


Basic Information

Item Value
gene id G29973
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 50053713 ~ 50053971 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU37507
ctgtctatataaggtcccacagttaacagtgcatgtcagagcataaaccaagccatgaagtccaaggaattgtctgtagactgcctagacaggattgtatcgaggcacagatacagatctggggaagggtacagaaacatttctgcagcattgaaggtcccaatgagcacagtggcctccatcatccataaatggaagaagtttggaaccaccaggactcttcctagagctggccgcccggccaaactgagcgatcggg

Function

GO: NA

KEGG:

id description
ko04390 Hippo signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU37507 True 259 lncRNA 0.49 1 50053713 50053971

Neighbor

gene id symbol gene type direction distance location
AMCG00008283 NA coding upstream 172361 49879979 ~ 49881352 (+)
AMCG00008281 NA coding upstream 456920 49587067 ~ 49596793 (+)
AMCG00008280 jph2,LOC107707015,LOC108275945 coding upstream 493633 49549906 ~ 49560080 (+)
AMCG00008272 NA coding upstream 582098 49469289 ~ 49471615 (+)
AMCG00008262 stk35,LOC105016730,LOC106583621,LOC103372836,LOC104935842 coding upstream 1113618 48923864 ~ 48940095 (+)
AMCG00008291 NA coding downstream 305016 50358987 ~ 50359865 (+)
AMCG00008292 NA coding downstream 312473 50366444 ~ 50403958 (+)
AMCG00008294 NA coding downstream 397339 50451310 ~ 50460054 (+)
AMCG00008296 NA coding downstream 508783 50562754 ~ 50582183 (+)
AMCG00008304 NA coding downstream 1279332 51333303 ~ 51336685 (+)
G29848 NA non-coding upstream 115367 49515484 ~ 49938346 (+)
G29883 tp53rk non-coding upstream 214389 49838005 ~ 49839324 (+)
G29877 NA non-coding upstream 255730 49796444 ~ 49797983 (+)
G29853 NA non-coding upstream 508982 49544362 ~ 49544731 (+)
G29823 NA non-coding upstream 674339 49368645 ~ 49379374 (+)
G29979 NA non-coding downstream 41067 50095038 ~ 50095273 (+)
G29986 NA non-coding downstream 71719 50125690 ~ 50126131 (+)
G29990 scrt2,LOC106572483,LOC103139108 non-coding downstream 93678 50147649 ~ 50148723 (+)
G29991 NA non-coding downstream 101733 50155704 ~ 50156262 (+)
G30016 NA non-coding downstream 213252 50267223 ~ 50267450 (+)
AMCG00008279 NA other upstream 195137 49839512 ~ 49858576 (+)
AMCG00008271 NA other upstream 634967 49404856 ~ 49418746 (+)
AMCG00008270 ttpal other upstream 758354 49288246 ~ 49295359 (+)
AMCG00008263 NA other upstream 882696 49163816 ~ 49171017 (+)
AMCG00008249 NA other upstream 2111959 47929667 ~ 47941754 (+)
AMCG00008288 ube2v1,LOC103467757,LOC101171992,LOC103139104,LOC103354371,LOC107090722 other downstream 268742 50322713 ~ 50356404 (+)
G30166 NA other downstream 1372610 51426581 ~ 51428055 (+)
G30232 NA other downstream 2046791 52100762 ~ 52101524 (+)
G30299 NA other downstream 2324358 52378329 ~ 52378776 (+)
G30300 NA other downstream 2327370 52381341 ~ 52382418 (+)

Expression


Co-expression Network