G30169


Basic Information

Item Value
gene id G30169
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 51441353 ~ 51441568 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU37731
tgtgtgtgtgtgtgtgtgtgtgcattaggAAGAATGATATAAATGaccaaaaacaggaaaataaataaataaataaaaaactcacCCATACCTACCCAGAATTTCGCACAATCTCGACAGATTTTCCCCGAATGagagatttttttctctccacgtTAAGTGAATGTAGTTATGCAGCCCGTGTCTTCAGTAGTTGAGCACAGAGTTGCATGTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37731 True 216 lncRNA 0.38 1 51441353 51441568

Neighbor

gene id symbol gene type direction distance location
AMCG00008304 NA coding upstream 104668 51333303 ~ 51336685 (+)
AMCG00008296 NA coding upstream 859170 50562754 ~ 50582183 (+)
AMCG00008294 NA coding upstream 981299 50451310 ~ 50460054 (+)
AMCG00008292 NA coding upstream 1037395 50366444 ~ 50403958 (+)
AMCG00008291 NA coding upstream 1081488 50358987 ~ 50359865 (+)
AMCG00008309 NA coding downstream 93902 51535470 ~ 51542896 (+)
AMCG00008308 pfdn4,pfd4,LOC107697845,LOC107758785 coding downstream 111038 51552606 ~ 51560087 (+)
AMCG00008310 NA coding downstream 210796 51652364 ~ 51657000 (+)
AMCG00008316 NA coding downstream 824865 52266433 ~ 52311801 (+)
AMCG00008320 NA coding downstream 870321 52311889 ~ 52315183 (+)
G30165 NA non-coding upstream 16403 51424663 ~ 51424950 (+)
G30164 NA non-coding upstream 17815 51420647 ~ 51423538 (+)
G30158 NA non-coding upstream 61560 51379568 ~ 51379793 (+)
G30146 NA non-coding upstream 262970 51178179 ~ 51178383 (+)
G30139 NA non-coding upstream 372646 51068140 ~ 51068707 (+)
G30174 NA non-coding downstream 22956 51464524 ~ 51466267 (+)
G30195 NA non-coding downstream 73907 51515475 ~ 51515731 (+)
G30205 NA non-coding downstream 122545 51564113 ~ 51571558 (+)
G30206 NA non-coding downstream 129154 51570722 ~ 51587545 (+)
G30219 NA non-coding downstream 347342 51788910 ~ 51789147 (+)
G30166 NA other upstream 13298 51426581 ~ 51428055 (+)
AMCG00008288 ube2v1,LOC103467757,LOC101171992,LOC103139104,LOC103354371,LOC107090722 other upstream 1084949 50322713 ~ 50356404 (+)
AMCG00008279 NA other upstream 1582777 49839512 ~ 49858576 (+)
AMCG00008271 NA other upstream 2022607 49404856 ~ 49418746 (+)
AMCG00008270 ttpal other upstream 2145994 49288246 ~ 49295359 (+)
G30232 NA other downstream 659194 52100762 ~ 52101524 (+)
G30299 NA other downstream 936761 52378329 ~ 52378776 (+)
G30300 NA other downstream 939773 52381341 ~ 52382418 (+)
AMCG00008334 prex1 other downstream 1549717 52991285 ~ 53087480 (+)
AMCG00008335 NA other downstream 1669435 53111003 ~ 53148134 (+)

Expression


Co-expression Network