G30283


Basic Information

Item Value
gene id G30283
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 52337044 ~ 52337267 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU37853
CTCCAGGGGTTGAAGAGCAAGATGAACTCTGCAATGTTATAGGTGTGCGACTGGTATGGAGACAGAATCTGAACGTGAAGCGTATGGAGGCCTATGCAAGCATCAGGGGGTGTGACAATGTGCACGCTTAGAGACCTGGATTGGATATCTCCGGGCTGAATCAGAGCACTCCACTGGGATTGGGACTGGTGCATCGAGAAGGTGGCTGGAAAGGaaacacttga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37853 True 224 lncRNA 0.51 1 52337044 52337267

Neighbor

gene id symbol gene type direction distance location
AMCG00008320 NA coding upstream 21861 52311889 ~ 52315183 (+)
AMCG00008316 NA coding upstream 25243 52266433 ~ 52311801 (+)
AMCG00008310 NA coding upstream 680044 51652364 ~ 51657000 (+)
AMCG00008308 pfdn4,pfd4,LOC107697845,LOC107758785 coding upstream 776957 51552606 ~ 51560087 (+)
AMCG00008309 NA coding upstream 794148 51535470 ~ 51542896 (+)
AMCG00008315 NA coding downstream 35031 52372298 ~ 52376305 (+)
AMCG00008326 NA coding downstream 110682 52447949 ~ 52483301 (+)
AMCG00008328 snta1 coding downstream 200013 52537280 ~ 52551487 (+)
AMCG00008327 NA coding downstream 223069 52560336 ~ 52566145 (+)
AMCG00008330 LOC106572151,LOC106524167 coding downstream 253264 52590531 ~ 52608548 (+)
G30269 NA non-coding upstream 47921 52288890 ~ 52289123 (+)
G30219 NA non-coding upstream 547897 51788910 ~ 51789147 (+)
G30206 NA non-coding upstream 749499 51570722 ~ 51587545 (+)
G30205 NA non-coding upstream 765486 51564113 ~ 51571558 (+)
G30195 NA non-coding upstream 821313 51515475 ~ 51515731 (+)
G30297 NA non-coding downstream 40192 52377459 ~ 52377854 (+)
G30232 NA other upstream 235520 52100762 ~ 52101524 (+)
G30166 NA other upstream 908989 51426581 ~ 51428055 (+)
AMCG00008288 ube2v1,LOC103467757,LOC101171992,LOC103139104,LOC103354371,LOC107090722 other upstream 1980640 50322713 ~ 50356404 (+)
AMCG00008279 NA other upstream 2478468 49839512 ~ 49858576 (+)
AMCG00008271 NA other upstream 2918298 49404856 ~ 49418746 (+)
G30299 NA other downstream 41062 52378329 ~ 52378776 (+)
G30300 NA other downstream 44074 52381341 ~ 52382418 (+)
AMCG00008334 prex1 other downstream 654018 52991285 ~ 53087480 (+)
AMCG00008335 NA other downstream 773736 53111003 ~ 53148134 (+)

Expression


Co-expression Network