AMCG00009504 (dgkd)


Basic Information

Item Value
gene id AMCG00009504
gene name dgkd
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 39884002 ~ 39922108 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009504
ATGGCGGCGGCGGCTGTTGCCGAGGCCGCGGCCAGGTGCTTGGAGGAATCCTCTGACAGCGAGCCGGAGCAGGAGCCCGGATCCCCGCAGAAATTAATCCGCAAAGTGTCCACATCCGGGCAGATCCGGAGCAAGACCATTCTGAAGGAGGGCATGCTCATGAAACAGACCAACTCCTTCCAGCGCTGGAAAAGACGCTACTTCAAACTCCGCGGCAGGACACTCTACTATGCAAAAACAGCAAAGTCTATCATCTTTGACGAAGTGGACTTGACGGATGCAAGTGTAGCCGAGTCCAGCACCAAGAATGTCAACAACAGCTTCACAaTCATCACACCGTGTCGGAAATTGATCCTGTGTGCTGAGAACCGCAAAGAAATGGAGGACTGGATCGCTGCGCTGAAGAGCGTTCAGAACCGGGAACACTTCGAGTCCACCCAGTACAGCATGGACCATTTCTCAGGGATGCACAACTGGTACGCCTGCTCTCACGCCCGCCCCACCTACTGCAACGTGTGCCGAGAGGCCTTGTCTGGGGTCACCTCTCACGGACTGTCCTGTGAAGtttgtAAATTCAAAGCCCACAAGCGCTGTGCCGTCCGGGCAACCAACAACTGTAAATGGACCACCCTGGCCTCCATTGGCAAGGACATCATTGAGGATGAGGATGGGATCTCAATGCCTCACCAGTGGCTGGAGGGGAACTTGCCTGTCAGTGCCAAGTGCACCGTGTGCGACAAGACCTGCGGCAGCGTCCTGCGTCTTCAGGACTGGCGCTGCCTCTGGTGCAAGGCTATGGTGCACATAGGGTGTAAAGAGCTATTGTCAAATAAGTGTCCCCTGGGTCAGTGCAAAGTGTCTGTAATTCCCCCAACAGCGCTGAACAGCATCGACTCGGACGGTTTCTGGAAAGCCACCTGCCCCCCCTCCTGCACCAGCCCCCTCCTCGTCTTCGTCAACTCCAAGAGCGGAGACAACCAGGGGGTGAAGTTCCTGCGGCGCTTCAAACAGCTGCTCAACCCCGCCCAGGTCTTTGACCTCATGAATGGGGGACCCCACCTCGGCTTGCGGCTCTTTCAGAAATTCGACACGTTTCGTATCCTGGTGTGTGGTGGGGACGGGAGCGTGGGCTGGGTGCTCTCAGAGATCGACACACTCACTCTGCACAAGCAGTGCCAACTGGGCGTCCTGCCACTGGGCACGGGCAATGACCTGGCACGGGTGCTGGGCTGGGGCTCGGCCTGCGATGACGACACCCAGCTGCCCCAGATCCTGGAGAAGCTGGAGAGAGCCAGCACCAAGATGTTGGACAGGTGGAGCATCATGGTGTACGAGACTAAGTTTCCCAGACAACATTCCACTTCTACCGTGACTGAGGACTGCAGTGAGGACTCTGAGGTGCAGCAGATCCTCACCTATGAGGACTCGGTGGCGGCTCACCTGTCCAAGATCCTGACCTCGGACCAGCATTCTGTGGTCATCTCCTCGGCCAAGGTTCTGTGTGAGACTGTGAAGGACTTCGTGGCCCGTGTCGGGAAGGCGTATGAGAAGACCCCAGAGAGCTCGGAGGAGTCTGAGGCCATGGCCAAAAAGAACCTAACAATGGTGTTCCTGTTTGGCTGTGGTTCTCTGTCTGACTGCTCTGGTCTCTCCCTCAATCCCCGGCAGTGTGGCGTCTTGAATGAGAAGCTGGACTCTCTGCTCAAGACCCTGAAGGAGGAAGCCCAGGCGTCCAGCGTGCTGCCCACCCCACCGCCCACCATTGccgaggagcaggaggaaggggagggggtgCTGCTGCtggcccccacccccaccctcaccTCCCTGCCGGCCCCCTGCTCCCCTCGGGCGGCCCCCGCCATCTTCAAACCCCGCGAGCAGCTCATGCTCAGGGCCAACAGCCTGAAGAAGGCGATCCGGCAGATCATCGAGCACACGGAGAAGGCTGTGGATGAACAGAACGCCCAGACCCAGGAGCAGGAGGTGTTTGCTCTCAGTCCGTCCTCGGAGGAAGAAAGCCGGGCAGAAGACAAGCTCTCTCTGCAGTCCTCCCACAGTGGGAACAACGCGTGCCCCAACGCCAAGGTCCGGCCGGCGCGCAGAGTGTCCAAATCACCCTGCGAGAAACTCATCAGCAAGGGAAGCCTGTCCCTGGGCAGCTCCGCATCACTTCCTGTGCAGACAGGAAACCGCGACAACATGCCCATGCTCAACACCAAAATCCTGTTTCCAAGTCTCCGAGCGGGCATGTCGGGGTCCCTCCCGGGCAGCTCCGTCATTAGCAGATTGCTCGTCAACGCAGACCCCTTTAACTGTGACCCTGAGAACCTTGATTGCTACACAGAGAAATGTGTGATGAACAACTATTTTGGGATTGGGCTGGATGCTAAAATCTCTCTGGACTTCAACAACAAGAGGGACGAGCACCCGGAGAAATGCAGGAGCCGCACCAAGAACATGATGTGGTACGGGGTGCTGGGgaccaaggagctgctgcacagGACGTACAAGAACCTGGAACAGAAAGTGTTGCTCGAGTGTGACGGACGGCCCATCCCTCTGCCCAGTCTACAGGGCATCGCCGTGCTCAACATACCCAGCTACGCCGGGGGCACCAACTTCTGGGGTGGCACCAAGGAGGACGATACCTTCACAGCCCCCTCCTTTGATGACAAGATCCTGGAGGTGGTGGCGGTGTTCGGCAGCATGCAGATGGCCGTGTCCCGCGTCATCAACCTGCAGCACCATCGCATTGCGCAGTGCCGCACGGTGAAGATCACTATCCTGGGTGACGAGGGGGTGCCAGTCCAGGTGGACGGGGAAGCTTGGGTGCAGCCGCCCGGGTACATCCGCATCATCCACAAGAACCGCACGCAGACCCTCACCAGGGACCGGGCCTTTGAGAACACGCTGAAGTCCTGGGAGGACAAGCAGAAGTGCGAGTTTGCCCGGCCCTCagcccagaatgcactgcagcCAGAGATTGTGTCGGAGGAGGAGGCGTCTCAGATCAATCTGTTCGGACAGGCGGCAGGAGCCCTCATTCACAGTATCCGGGAGATTGCGCAGTCTCACCAGAACATGGAGCAGGAACTCGCGCACGCCGTTAATGCCAGCTCCAAGTCCATGGACGTCGTCTACGCCAAGTCCAAGAACACGGAGGGCCTGAACTGCAGTGTGGTGGCGGAGATGGTGAGCAACGTCAAAGCGCTGCACAATGAGACCGAGCTCCTGCTGGCAGGAAAGATGTGCATGCAGCTCGACCCCCCTCAGAAGGAGCAGCTGACCAGTGCCCTGGGCAGTGTGGGGCAGCAGCTCCGCAAGCTGGCCGACATCCCCTGGCTGTGTCAGATCATTGAGCCCTCGGACGATGAGGCTCACATGATGGAGTTTTCCAAGAGGAGCCGCAGTGCCAAGTTTCGCCTGGTGCCTAAATTTAAGaaggacaaaaacaacaagaataaagAGGCCAGCACCAGCTTGGGGCTACCGGGGGCTTCCTTTCTAACAGTGCACCAGTGGGGCACGGAGGAGGTGGCGGCCTGGCTCGAGCTGCTCAGCCTCTGCGAGTACAAGGAGATCTTCATCGGCCACGACGTCCGCGGCGCTGAGCTACTGCACCTGGAGAGGCGCGACCTCAAGGACCTCGGAGTGACGAAAGTGGGTCACATGAAGAGGATTTTACACGGGATCAGGGAGCTGAGTCGGAGCACTCCCACCAGCGAGGTGTAGTCTTTCTTTTCTCGGCCTGCGTCTGCCAGAGGCCATAGGCGGCAGCAGGCGGCGAGGAACACCGAGCTCTCTGTGAGGACGGAGCTATTCGCAGAGTGCCTCTAGCAACCAGCTGCTAAGCTCATATCCATGCATCTCAAACCCATCCTGGAGTGGGACGGCCATTCCGCTCTTCGGCCAGTCAGTCTGTGATACGAGACCATTTCCTGAAGGGGACCAATCACGTCACAGCactgtcccccccacccctcgcCCCTCTCAAAACAGGGCTTTCTCCTTTCAAGCCTCTCCCCCAGATCAGTGGACCAAGCAGCAGCTCAGTGTGCCTTAGCTGGTCTGACTCCACTGCCAATTCCGTTTACCCATAATGCACTGCACCAGTGCAAGTCCAGCTCAGAGCAGCAGCTGTTGATTTTGGTCTTGTATTCCAGGCACGGGATGTTATTCCTAAACCTCATGAAGGCCTTGACCAGGAAAGGAAACGGCTTTTCTCTTAGCTGCCTAGGAAGTATTATAAAAATCGATTGACTTGAAGACAGGCCTGACGGAATTggcttttttaaaattttattggATAACTTTTGATGATCAGCCCAGTCAAACTTACAATCAATCAAACTGCCTTCGCTCCAAGGGGAATTTACAGGAGGATACAAATGTTTAAggaaattatcaaaataaatttgatATCAATTTTTGTTCTCCCTCCAAAAACTAATACAGCTTGCTTTTTCAGAGTGTTAACTAGAGCTGGCGCAGGGGGATCTCACTGATAGActgcaacagaaaacaacaggaaCAGCCTTGACTGGGCACCGCTCCGGCTCAGGCCAACTCAGTCGAGACTGTGCCGCCATTACCTTGTGTCAGTCTGTCGGTCGGGCCTAACCTCAGCCCGCCTTTTTGAAAGCCACACCCAGGCGCAGAATGTTCCCAGCCAGCACTTTGCCAGTCAGAGCCCATCACTCTGGTCTGGGACACCAGATGCCTGCCATAATGTCACACAGCACATGCAAATCCCAGGACACCAGCACTGCCAACCGGAGCACAGCTGgcctttgtgtttcttcaggcgtttctttctttccatACACTCACTGAGCCACGGTTAAGTCCAAACGGATCTAAAGCCACCAAACCTGTCAGCTTTGGCAGCAAGTGTGTCCCAGTGTTATCAGTGTCTCGATCATATCTTGAAAAGTGCtttggtctgtttgttttggtttttggaGTCTACAAAATTATCACTGTGATCTGCTCTCTTTTACCGTTTCCATTGAACAGTATGTATACCGGTATTTCGATGTACAGAACAAGCGAAGAACGCAggcttgttttcttgtttgtttcctccATTGTGCCAAAGGTTAAAACTGTAACCAGGTTATCTCTGGAAGCCTGTCAAAGACTCAGCGTGTCACTGAATCCAATGTGTCATATCTGAACTGATACACCAGCGCTTGTGTTAAACTGCAATTGAAAAAAATGGGGAAATCACATGCGCTTTGTTTATTAGATGCACATCCCGTTGAGAGGTTGGGAAGAGGAAGGGAGGGGTTGTTTGCCTGTCTTGGTGATATCCAGTCAATTTTTATGACTGTCCCCAAAAAATGGTCTTACCAATGAAGTGCAAAAAACAATCTCTACTGTGGGTATCCACTGTAATATGAAGAATTCCCTTAAAgcagaatgtaaaataataataatttaggtatataatttagtttatatttttaaggattaatattaacaacttggctttatttttgtgtgaaatgtgaCCACCTTTGACCTTAATGAAGAATTTCACCTGCATTTGCATTGAGATCTGGAGTGGAACTTTGTTGGCATTCTGCTCCAGGAACGGGCCAGTCTTACTACACGTTTCTctggtattttttttcagaGTGCATTGTATAATTCACACAACACTATTGTTGAGTCTGCAGAGGGCTTAATGAGGCCGCTACTTTGTATTGGTGTCCTCAGCCATGCCTGCATTACATGCACTTACGATCAGAAGGGGCCTTTTTCCTGACTGATAGTGTCCCATTTTGCACTAATTGCAATGCCTCATTGTGGTGGCTGCTGCCCCGGCCCgctgtctgtttttaatcaagCTGATCAGTCACTGGTCTGTCTGTGTATTACTGCTGCACACATCTTCAGGTCACCAGGGCAGATAGCACTGCCACAGCCACTTGGAAAATATCTCACTTTCGTCTCACAAAAAGCCAGCATTACCTTTCAATCTTTTTCCTCGTAACTCCAATCAGATTTTCTCTTGAATATCAAGCAGATGAGTCTAATTCCAATGCTTTCTTAAAAACTAAGTGCTCCTTCTGTGTTTTTGCGTGTTTGGGAAGGAATGTGAAGACTTGGGGAAAGCCGAATTCCTAAAGAACGCTAAGTATGTTCTGATTGTCTGGTCCAATACATTTCCCACACTTTGACCAAGATGACTTTGCTGGGAACAAGCAAATGTGCTACCCATGGAACTGTGTGTGCTGTGAATTCAATTGATCTACACGTGGGAGTAATGGAAGTACAGGTGTCTTTGTGTTGTCTTCTAATTGTTTGAATAGTCCAGAAATGGAATGAAAAgtattgtcattatttacaaaaaacgttatgtattatgtactatTTCATAAGAATTGGGTTGAATCTCAAATCCTCTGACGAGTGACCAGAGGGCAGGAATATAGATGTGTAACTAGCTCAGAACCTCTACATTAGCCGCTCAAGCCATAGGTTTACTGCACCAATGAGCCAACCTCACTGTAATTACACAGGCTGGCAAGGAGATAGGGGGTGGGCGCCCCCTGCACTCCGGGAGTGGTATCGCACCTACAGTAGGTGATGCAAAAAATCAAGCAGACACTTTTATAATAAGGGGCCAAATTTCCATTACAATTATACATGATACATTATTTCTTATGGAGTTCATACTGGTGCTTATGAAGGCTGTATTCATGATGTATTCCAAATGTATTTCCCTTCATCAGCATGTACAGTCACCTGTTAGACGGTGTCACCAGGTCAGGGAAGTTTACCCTGTTGAGTAATGTCCATCCACCTGTGTTGACACACTATCACAGctgtaaacagtttacagaATGCCATGTTTCTGCAACTGTGCCTGTGACGTCTCTGCCACGAAGGCAGACGGTCTGTATCAAGAGGGCAAAATCAAGACTGTCCCTCGCCACTGTGAATGTACCCTTCCAGGGTGTATTATTGTGCACCAAGTGAAATTAGTATAGacttttatttacagaaatcaaaagaaagatctgaacaatgtttaaataactgaaaactgTAGGACTGAAACAAATCaaggattttcattttattgatttgattgtttgattttcGACTGCCCCCCGGTAGGTGTCACTGAAACGCTGCTTGAGACAGTTTCATCCCCGTCAGTTGAATGAACCTCATCAGCTGTTTGAGGGCAACACTTTGAGACTTAAGATATTCAGGGGCttatttgtcttgtgttttctATATTGCAGGGCTTGGCACCCCAAAACAGAATCGCAGCCcattttcctctctcttctgTTAAGTTGTTCTCATGTTTTTAtgatacttttttgtttgattgttttgaggTTGTTGCTTTTTAAGGAAAGCTAAACCGCCCAATAGTATAAACAGCCTTAACTGAATTGTCCAAAAGCTAGCCTGCCATTTTCTCATCATCGAAGGGGTTTGTAAAAACACAGCCATTGTGAAACGGTGGCACACATTGATCTCCTGCATTCATTTGAAATCCCTGCTATTGAGctaaaaaatgcattatgttAATGTAACCAGTGCAGTCATAGCGGAAAGTATTCAAACCTTTAATCTGATATACTTATGCGGCGAtccatttgattcaatatagtttattaaaatagacATAGGCCATGTTCATACGTGTGTTTCATCAGTGGTCAACAAACTGTGAAAAGACACTGCCAATAAagaataagtaaaaataaaactgacttGGCAAATAATAAGTATGAAACTGAATGAATGGATCTGACTGACACTGGTGCAAGCAAAGGGGAGTGCGTGTCTTTGACTACAATTGTATATTTATCCTATTCCCCAGTATCACCAGCAGTTTCCCAGAGTAAGACCGAGTGGGCTGTCAGCCCTGGTTGTGGGAACCCAGcctcttttgtttgtgtctttttctaaaataagtttaaatgcGGGGGTTGAAGACACGGACACAGACTTCCCAGAGCTCCCCGTACCCACGCCGTTACCTCCTGCTTTTTCACATCCGCACATTGAAACGCTGAGGAAAGGGGAGGGCTAGCAGGACGGCGCCTGCGTGATTAGACTATTTCCCTGGGTTTTCCTGGGAACCGACATGCCATAGGTGTCACTTATATATGCAAAATTGGGACCTCTTCCTCTTTTGTGCATCCTTTCCCTAGACCAAATCAGCATTCGTATCGTTTGAATAGGCACCCGGTTCTAGGGAGTTCTGTACAGAAGCGTTGACAATCTGTTGGGAAAGGCTGGGGTTCAATAAATGTGAAATCTGATGGCATAACCAGCATTGCCTATGAGAGGAAAatctaaaaaattaaaacaaacatcttgaggaggcctgTTAGTTTTTTCTGCCCCTCAATTATGAATCTTTGTAGACTCGTAAAAGAAACAATCTTGAGGagttacatttgaaatacacctttttaaaaaaatatatattttacctttACATACAGACTACATATCAAATTAAAGTTTGAAAGGGGTATCTTTTTCGAGGAAATAGGACAGCATTCTGCTGAATTTACAGCACTGAATGTGTAAACCGAACACCTCGGTAGTATTTGTACGGTACTTGATTCTTGGACAAGCTAGCCATGGAAAACGAGAGTTGTGAATGATATCCTATAAGCTGTGTTTGCCTTTCTAATGACATGTCAGGACTATTGCTGACAAAGATTTTACCTGCCCGACGAGCATCACTGTTTCACCATTTAATGCTTCGTATACTATGTGCTGGACTGGGTGAGATCGTCTCCTTCTCTTCTGTGCACCCTGTTTCTGCACAGTTTCACCGgtcccagcagtggatcgagcCTTTTGTAATTATTAGTGAAGACAAATCGGGGTTAAAAAAATGACGACGAAGAGATGGAGTAATTAGCAAGTCAGGTTGGCACACAAGTACACCTCAAGAGACCTTCATGAATTGCAGGAATGTAGGGTTGTGAATGTTGACCAGAAATGTGGCCTAGCGATGCCGTCAAAGTCCTCTGTGTTGAAATCTTTCTTTTGATGTTCGTCTTGCTATGGGCTTTGGTCGTCGTTATCTTTATCCTGCACAGTTCCTCGGTACACTGTTCCTGGGTTATTTAACTCCACAGTGCCATCCTCAGAGGCCGCAGTCGCACTGCATCGCCACCGGTTGCCTAGCTGTGTGATGATACTCAGCTTGGGCTCCAGTGTCGCGCCACCTCACCACCCCATTGCCAGCACACCTCTGAAgtatttattgcttttaatttatagAGAATTGTACGGTCTGTTCAGATTCTGTCGTCTCTTATGTCTGTGTACATAGTCCCACCCGAGGGATGTAAATACATTGTTCTTGTACAGGAAGCACCAATCTTCcattaaaatctgttttcatttacagCAA

Function

symbol description
dgkd Enables diacylglycerol kinase activity; kinase binding activity; and protein dimerization activity. Involved in several processes, including glycerolipid metabolic process; lipid phosphorylation; and positive regulation of clathrin-dependent endocytosis. Located in clathrin-coated pit; cytoplasmic vesicle; and cytosol.

NR:

description
PREDICTED: diacylglycerol kinase delta isoform X1

GO: NA

KEGG:

id description
K00901 dgkA, DGK; diacylglycerol kinase (ATP)

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009504 True 9409 mRNA 0.49 30 39884002 39922108

Neighbor

gene id symbol gene type direction distance location
AMCG00009498 NA coding upstream 11280 39865728 ~ 39872722 (+)
AMCG00009495 atg16l1,LOC107689588,LOC107551872 coding upstream 20821 39845409 ~ 39863181 (+)
AMCG00009497 NA coding upstream 40138 39839181 ~ 39843864 (+)
AMCG00009499 NA coding upstream 46365 39827306 ~ 39837637 (+)
AMCG00009496 NA coding upstream 69224 39807424 ~ 39814778 (+)
AMCG00009506 NA coding downstream 826 39922934 ~ 39930133 (+)
AMCG00009505 NA coding downstream 8038 39930146 ~ 39938281 (+)
AMCG00009503 NA coding downstream 45189 39967297 ~ 39982047 (+)
AMCG00009510 polr2d,rpb4,LOC106612892,LOC107671669 coding downstream 99973 40022081 ~ 40025439 (+)
AMCG00009512 NA coding downstream 106684 40028792 ~ 40029460 (+)
G57401 NA non-coding upstream 8832 39874881 ~ 39875170 (+)
G57378 NA non-coding upstream 77074 39806583 ~ 39806928 (+)
G57329 NA non-coding upstream 424326 39459398 ~ 39459676 (+)
G57287 NA non-coding upstream 577228 39306488 ~ 39306774 (+)
G57286 NA non-coding upstream 577772 39303337 ~ 39306230 (+)
G57428 NA non-coding downstream 19114 39941222 ~ 39943036 (+)
G57457 NA non-coding downstream 108438 40030546 ~ 40033333 (+)
G57523 NA non-coding downstream 237301 40159409 ~ 40159626 (+)
G57544 NA non-coding downstream 417274 40339382 ~ 40343381 (+)
G57597 NA non-coding downstream 906964 40829072 ~ 40829677 (+)
AMCG00009480 sst1.1,LOC106579799,LOC105009822,LOC107586749,LOC103023622,LOC107582287 other upstream 446985 39434900 ~ 39437017 (+)
G57105 NA other upstream 1426410 38442255 ~ 38457592 (+)
AMCG00009428 NA other upstream 2267306 37608305 ~ 37616696 (+)
AMCG00009429 NA other upstream 2278878 37530822 ~ 37605124 (+)
AMCG00009415 wwtr1,LOC107588432,LOC107732229,LOC107662944,LOC107572084 other upstream 2420497 37422017 ~ 37463505 (+)
G57430 NA other downstream 25898 39948006 ~ 39949200 (+)
AMCG00009516 NA other downstream 164366 40086474 ~ 40105052 (+)
G57604 NA other downstream 1068694 40990802 ~ 40994659 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other downstream 1674121 41596229 ~ 41599124 (+)
G57830 NA other downstream 2113910 42036018 ~ 42078241 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location