AMCG00009562


Basic Information

Item Value
gene id AMCG00009562
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 41560388 ~ 41568832 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009562
ATGCAGGAGGGGTCAAGTAGTATCTGGCCCCCAGGAGGCTACAACAAGGTGACGACTGCCTTGTCACCTGAGAAAGACATGCAGAGGGACGTCTCTGGTCAGGATCACATCCTCATCATGAACGACATCATAAAGAGCTGGGCTGACATCATGACCTTTGGCGGAGGAAGATACTTCATCGTTCCCACAGGGGTCTTTCTGTTTGCCTTGCTTCTGGCTAACCCCATATCCCTTTTCGCCATCTTCTCCAGCAGCAAACTCCTCCAAGAGACGCGATACAAACTGCTAGCCAACACCTTGATCACCGATTTACTCTATTCCTTCATCTGCTTCGCTCTGACAGCCACCAACATCTCCCCTGTGATTTTCCCCGACCTGCTCTGCGAGATTCTACTCAGCCTTCAGACGGTGGTGTTCTTTTCTGGGTTCCTGAACATCACCGCCATGGGGGTGAACATCTACTTGGCCATCAACTGGCCTCTGCAGTACAACTCCATCTTCACTCCTTCCAGGGCTGTGAAGCTCATAGTGACTATCTGGCTCCTGTCCTCCATCATCCCCCTCGTCTCGTACATCCTCCTCTCCGGTGACCAAGGCCTGCTTTGTGACATACCCGTGTGCTTCTTCAACATCCTGTTTTTTCTGCCTCACCCCAACCCCGTCGTCCAGGAGATGAACTACGTCGCCGTGGTGGTCATGTGCACCGCCTGCTCCGTTCTGGTCTTCGTGTGTTTCTACCTGCTGGTCTGGAGGACTCGGAAGTCGGGCATCTGGACCGGGATGCACTCCAAGGCCAGGCAAACCATCACCATCCACTGCCTCATTTTCTCCTTCTACTTCCTGCCCACCATCATCATGGTCATCCAGAGGGTCCTGCTCTCCTACAGGCTCATGCACATCAAGTCTATGCTTTATGTCACCATGACTGTCAGCAATGTCGTGTTGCTGATCCCCAAGGCCTTGACTCCTTACCTGCACGGCTTCAGGTGTGAGGAACTCTCCGTGGCCATCCAGTCTCTGCTCAAAGGCAGGTCCCAAATCAGTCCTTCGGGTTGA

Function

GO: NA

KEGG:

id description
K08432 GPR148; G protein-coupled receptor 148

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009562 True 1056 mRNA 0.53 2 41560388 41568832

Neighbor

gene id symbol gene type direction distance location
AMCG00009554 NA coding upstream 50541 41504994 ~ 41509847 (+)
AMCG00009555 NA coding upstream 61583 41485230 ~ 41498805 (+)
AMCG00009552 NA coding upstream 80392 41476537 ~ 41479996 (+)
AMCG00009550 NA coding upstream 125189 41433263 ~ 41435199 (+)
AMCG00009551 NA coding upstream 146313 41405896 ~ 41414075 (+)
AMCG00009556 NA coding downstream 17834 41586666 ~ 41588754 (+)
AMCG00009564 NA coding downstream 109720 41678552 ~ 41683695 (+)
AMCG00009568 NA coding downstream 206377 41775209 ~ 41784537 (+)
AMCG00009569 NA coding downstream 264039 41832871 ~ 41844457 (+)
AMCG00009575 NA coding downstream 333001 41901833 ~ 41910118 (+)
G57690 NA non-coding upstream 60170 41499964 ~ 41500218 (+)
G57599 NA non-coding upstream 627178 40932967 ~ 40933210 (+)
G57597 NA non-coding upstream 730711 40829072 ~ 40829677 (+)
G57544 NA non-coding upstream 1217007 40339382 ~ 40343381 (+)
G57523 NA non-coding upstream 1400762 40159409 ~ 40159626 (+)
G57770 NA non-coding downstream 180723 41749555 ~ 41750144 (+)
G57775 NA non-coding downstream 247089 41815921 ~ 41817795 (+)
G57792 NA non-coding downstream 270333 41839165 ~ 41839466 (+)
G57843 NA non-coding downstream 516447 42085279 ~ 42088145 (+)
G57940 NA non-coding downstream 833403 42402235 ~ 42402452 (+)
G57604 NA other upstream 565729 40990802 ~ 40994659 (+)
AMCG00009516 NA other upstream 1455336 40086474 ~ 40105052 (+)
G57430 NA other upstream 1611188 39948006 ~ 39949200 (+)
AMCG00009480 sst1.1,LOC106579799,LOC105009822,LOC107586749,LOC103023622,LOC107582287 other upstream 2123371 39434900 ~ 39437017 (+)
G57105 NA other upstream 3102796 38442255 ~ 38457592 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other downstream 27397 41596229 ~ 41599124 (+)
G57830 NA other downstream 467186 42036018 ~ 42078241 (+)
AMCG00009647 NA other downstream 1868158 43436990 ~ 43444420 (+)
G58324 NA other downstream 2364120 43932952 ~ 43935762 (+)
G58522 NA other downstream 2817665 44386497 ~ 44407568 (+)

Expression


Co-expression Network