AMCG00009586


Basic Information

Item Value
gene id AMCG00009586
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 42266822 ~ 42271197 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009586
ATGGAGGTTACAGTCAGAGATATAATGGCAAGCCTTGAAAAATATATCCCGTCCCCAAAGTCCAACGTCAATTTCAGTCAGTCGACGAGTGGAAAGAACAGTGAGGCGACTGTGATCGAGCCCAAAAAAAAGTACTGCGTGGGAGAGACTCTGAGCGTCTTGGTGCAGATGAGGGACCACCGTTTTTACCTCAAGACCTACGGAGGCGATTTCATCACAGCCCGGATCTATTCTTCCAATCTGAAGGCAGCAGTTTCGGGGGTTGTCGAAGACTTGCAGAATGGTACCTACCGAATCAATTTCAAGTTGTTCTGGCCAGGGAAAGTGACGATCCATTTGCTGCTGATCCATTCCAGCGAGGCTATCTCGGCTCTATGGAGAACAAGGCAGCAGGACTATGATAAAATTCTTTTCACGGGGGTCTTCATCAATggcacaaagagagagacatcaCCCTGCCGGTTTGTGAAGAGCCCGAATACTACCGTGTGTTCTTACGGGGATGAGCGGGATGGTGAGCGTTTTTACTGTCTCAAGACGCACTCCCTGCCTTGCGAGGCTCTGTATGAAATGGTCACGGGCTACAATCAAACCAGACTTTTCAGCACGGAGGAGAACAAGATGCTGCAAAGTGGCTACTTTTTCCAAAACAAGTGGTTCTCCTCCTACTGCCACACCGAGAACTTCCTCAGTCCAGACTCCATCACTGGCTGCCTGCGGGACAAAAGTCTGCATTTCAGGGGCGACTCCACTTCTCGCCAATGGATTGAGTATTTAGTGGCAAAAATTAAAGATCTGAAGTACACCATTCCAATGGATGGCAACGTTCCAAGGCTGGCCATCTCGAGCAATCATAACTTCAGTGTGCAGTGGAAAAAACACGCTCATCCATGGATGACTGGAACACCACAGCCTTTACATTATGCATCATACATAGCTAGAGACCTTGACAGTATAGCAGGGGGAGAGAACACTGTGATTATGATCTCTGTGGGCCAGCATCTGAGGGCCTTCCCTATACAGCTTTTCATCAATCGCATCATTAGTATCCGACGGGGAATCGAAAGACTGCTGCAGCGGAGCCCCCTGACCAAAGTCTTCATCAAAAATGAGAACACACGGAATATCTGGGAATACATCAACGTTTACAATAACTGGCATGGGCATCTAAATAACTTGGCTCAAAAGGAGGTGTTTAAAGGGCTGGAAGTGGGATTTGTGGATGCCTGGGACATGACAATAGCTTCCAATGAGTTTGCAGTCCACCCTGCAGAAATGGTTATCAGCAACCAAGTGGCCATCTTCCTCTCCTACCTCTGCCCCTCACAACCAGCATCCCCTATACCTTTCCAGTGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009586 True 1359 mRNA 0.48 3 42266822 42271197

Neighbor

gene id symbol gene type direction distance location
AMCG00009587 LOC107712663 coding upstream 42303 42213604 ~ 42224519 (+)
AMCG00009588 NA coding upstream 55274 42193294 ~ 42211548 (+)
AMCG00009580 LOC103374679,LOC100699862,LOC108250355,LOC107390564,LOC104941073,LOC106535138,LOC103468062 coding upstream 91122 42170346 ~ 42175700 (+)
AMCG00009581 NA coding upstream 188531 42075478 ~ 42078291 (+)
AMCG00009578 NA coding upstream 224611 42036018 ~ 42042211 (+)
AMCG00009593 NA coding downstream 4802 42275999 ~ 42280429 (+)
AMCG00009591 NA coding downstream 18957 42290154 ~ 42298090 (+)
AMCG00009594 NA coding downstream 114302 42385499 ~ 42399331 (+)
AMCG00009600 gpr173,LOC108265110,LOC107549979,LOC105898994,LOC107731146,LOC107678674,LOC107549585,LOC107745752 coding downstream 143008 42414205 ~ 42415545 (+)
AMCG00009595 NA coding downstream 175760 42446957 ~ 42463730 (+)
G57843 NA non-coding upstream 178677 42085279 ~ 42088145 (+)
G57792 NA non-coding upstream 427356 41839165 ~ 41839466 (+)
G57775 NA non-coding upstream 449027 41815921 ~ 41817795 (+)
G57770 NA non-coding upstream 516678 41749555 ~ 41750144 (+)
G57690 NA non-coding upstream 766604 41499964 ~ 41500218 (+)
G57940 NA non-coding downstream 131038 42402235 ~ 42402452 (+)
G57945 NA non-coding downstream 144393 42415590 ~ 42418109 (+)
G57946 NA non-coding downstream 146944 42418141 ~ 42418505 (+)
G57947 NA non-coding downstream 147393 42418590 ~ 42420823 (+)
G57948 NA non-coding downstream 156645 42427842 ~ 42428048 (+)
G57830 NA other upstream 188581 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 667698 41596229 ~ 41599124 (+)
G57604 NA other upstream 1272163 40990802 ~ 40994659 (+)
AMCG00009516 NA other upstream 2161770 40086474 ~ 40105052 (+)
G57430 NA other upstream 2317622 39948006 ~ 39949200 (+)
AMCG00009647 NA other downstream 1165793 43436990 ~ 43444420 (+)
G58324 NA other downstream 1661755 43932952 ~ 43935762 (+)
G58522 NA other downstream 2115300 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 2290580 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 2313365 44584562 ~ 44603609 (+)

Expression


Co-expression Network