AMCG00009591


Basic Information

Item Value
gene id AMCG00009591
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 42290154 ~ 42298090 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009591
CTGATTTGCGTGGCGCAGGGGATAAATACACTGCCTGGAAATGGCAGGATTCATCGACGAGAGACGAGCATTGCTGTAAAGATGAGGACCTGCAAGCCAGTTCTCACCCTCTTGCCCGTGCTGCTGGCAGCTCAGCTGTCTGGAATAGCTGCTAGATCTCTCCTTGACAACTCGGAGGAGCTGAATGGAGAGCAGCTGTTCCATCAGAGGGAACTGGAAGCAGCGGACTTAAACGATGACCTGGAGGAACCTGAAGATCAGAAACCCAGAGTGCAAGGAAAGAGAGAAGAGGATTCAGAGGACTACAATGAATACAATGACATTGGGGAGCATGGAGAGAAGGGGCTGGAAAAGAGAGAGTATGAAGCAGAGTCAGCTGACAGTGAGGCACGCAGAGTGGTAGACGAGAGAGAAATAAGTAAGTACAGCATTGAGAAAGAGGCTGGGGTGGGCTGGGGTGGGCTTGCTGACCCTGCGCTGGGGAAGAGAGCGAACACTGACTCTGAGGTGGTCCTGACATACTCCAACGTGATGAAAAGGGAGGACCTGGCTAAAAGATTTTACCGCAACCGCAGCATCTGCATTCGTTcgGGCTGCTACTATGATCCCATAGTCTGGGTTACAGCTCTTTACGAGTCCATAAAGAAGTATGCCTTCTACAGTCTGAGAGCTCAGGTCCAGCAGGAATTCTTTGCCACTTCATGTAGACGCTACGGCTACTATAACTTCTACCGCTACCGCTATGGCAGACGCTACTGCAGGCGTTGGACTGTGATGGATGTGCAGGGGGCCAATTCCTCCTGGCTGTACAGCTTTTCTGAGGATCTGAGTTCTGTCACCTGGTGGCCCCACCCACACGGAGCCTCGATGATGATGTTCATGTTCACCCAGGGGCTTCAGCCCAATGAGATGAAGAGCACGGGGGCAGAGACAGGAGGCAGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009591 True 945 mRNA 0.53 12 42290154 42298090

Neighbor

gene id symbol gene type direction distance location
AMCG00009593 NA coding upstream 9725 42275999 ~ 42280429 (+)
AMCG00009586 NA coding upstream 18957 42266822 ~ 42271197 (+)
AMCG00009587 LOC107712663 coding upstream 65635 42213604 ~ 42224519 (+)
AMCG00009588 NA coding upstream 78606 42193294 ~ 42211548 (+)
AMCG00009580 LOC103374679,LOC100699862,LOC108250355,LOC107390564,LOC104941073,LOC106535138,LOC103468062 coding upstream 114454 42170346 ~ 42175700 (+)
AMCG00009594 NA coding downstream 87409 42385499 ~ 42399331 (+)
AMCG00009600 gpr173,LOC108265110,LOC107549979,LOC105898994,LOC107731146,LOC107678674,LOC107549585,LOC107745752 coding downstream 116115 42414205 ~ 42415545 (+)
AMCG00009595 NA coding downstream 148867 42446957 ~ 42463730 (+)
AMCG00009604 NA coding downstream 190347 42488437 ~ 42489969 (+)
AMCG00009606 NA coding downstream 233627 42531717 ~ 42546719 (+)
G57843 NA non-coding upstream 202009 42085279 ~ 42088145 (+)
G57792 NA non-coding upstream 450688 41839165 ~ 41839466 (+)
G57775 NA non-coding upstream 472359 41815921 ~ 41817795 (+)
G57770 NA non-coding upstream 540010 41749555 ~ 41750144 (+)
G57690 NA non-coding upstream 789936 41499964 ~ 41500218 (+)
G57940 NA non-coding downstream 104145 42402235 ~ 42402452 (+)
G57945 NA non-coding downstream 117500 42415590 ~ 42418109 (+)
G57946 NA non-coding downstream 120051 42418141 ~ 42418505 (+)
G57947 NA non-coding downstream 120500 42418590 ~ 42420823 (+)
G57948 NA non-coding downstream 129752 42427842 ~ 42428048 (+)
G57830 NA other upstream 211913 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 691030 41596229 ~ 41599124 (+)
G57604 NA other upstream 1295495 40990802 ~ 40994659 (+)
AMCG00009516 NA other upstream 2185102 40086474 ~ 40105052 (+)
G57430 NA other upstream 2340954 39948006 ~ 39949200 (+)
AMCG00009647 NA other downstream 1138900 43436990 ~ 43444420 (+)
G58324 NA other downstream 1634862 43932952 ~ 43935762 (+)
G58522 NA other downstream 2088407 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 2263687 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 2286472 44584562 ~ 44603609 (+)

Expression


Co-expression Network