AMCG00009656


Basic Information

Item Value
gene id AMCG00009656
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 43671769 ~ 43720150 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009656
ATGGAGAAGCAGTACATCGCTGGACTCCCAGCCATCAGAGCAGAGGACAATGGGGTAACATTGTTTGTGATGGCAGAAATAGGTAAACACGGGAAGCTACATGGGTATAAAATGATGCAccttaaatgcattcaacagGGCTTTGTGGAAACTCAAGCCACCAGATGCCTTCTTCACACACTGCATCCTGAAGGGGTCATGTCAACAGCGTCTTACCTGGGTTGCTGGAGCGGAGAGAGTCTGCTGCCTGCCCCTTTGCTGCGAATGCACCTGCAtccagagacacagagagaagatGTGAACCGAGAGGTGACCTGGCGAGTTCTGCAGGTGGCCATGCCAGTCACTAAAGAGCACCATCGCTGGTGTCAGTTCCCTGGGTTTCTCCAGCTTGATGAAGACTGTAATCTGAGGGCTGCGAGCCAGCAGTCTCTGGATGGCCCTGTGGATACTGAGAAGCCTGTTGATGAAGATCTCCAGAGGGAAAGCCCTCAGGTGCTGCCCTACCCCAATGACCACAGCCACATTCTGCCCCCCCCCTATCCTGTCCAGCTCGTGGGAGATCAGCAACCTGGGGGCTTGAAATTCAACCTGGCCAATCAATGTTCAACAGTCCTCACCATAACAGCAGCAGCTCTTAATGAGAGCAGCAAGGTTCGGGAACAGGCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009656 True 672 mRNA 0.53 5 43671769 43720150

Neighbor

gene id symbol gene type direction distance location
AMCG00009646 NA coding upstream 246919 43416831 ~ 43424850 (+)
AMCG00009640 NA coding upstream 353268 43315628 ~ 43318501 (+)
AMCG00009635 fam50a coding upstream 398397 43267927 ~ 43273372 (+)
AMCG00009634 NA coding upstream 404870 43258520 ~ 43266899 (+)
AMCG00009639 NA coding upstream 418707 43252202 ~ 43253062 (+)
AMCG00009654 NA coding downstream 16447 43736597 ~ 43740863 (+)
AMCG00009653 NA coding downstream 23304 43743454 ~ 43748128 (+)
AMCG00009655 tbc1d25,LOC104943506 coding downstream 31333 43751483 ~ 43756359 (+)
AMCG00009658 camkvl,LOC101077320,LOC105006803 coding downstream 114733 43834883 ~ 43852529 (+)
AMCG00009659 uba1 coding downstream 138931 43859081 ~ 43873704 (+)
G58214 dedd,LOC108411641,LOC107758014,LOC107699191,LOC107603111 non-coding upstream 347190 43318916 ~ 43324579 (+)
G58215 NA non-coding upstream 360707 43309860 ~ 43311062 (+)
G58195 NA non-coding upstream 422128 43249403 ~ 43249641 (+)
G58178 NA non-coding upstream 458741 43212710 ~ 43213028 (+)
G58148 NA non-coding upstream 661719 43006601 ~ 43010050 (+)
G58304 NA non-coding downstream 153631 43873781 ~ 43875723 (+)
G58317 NA non-coding downstream 189438 43909588 ~ 43915760 (+)
G58319 NA non-coding downstream 201324 43921474 ~ 43926631 (+)
G58467 NA non-coding downstream 449335 44169485 ~ 44169789 (+)
G58510 NA non-coding downstream 605001 44325151 ~ 44325573 (+)
AMCG00009647 NA other upstream 227349 43436990 ~ 43444420 (+)
G57830 NA other upstream 1593528 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 2072645 41596229 ~ 41599124 (+)
G57604 NA other upstream 2677110 40990802 ~ 40994659 (+)
AMCG00009516 NA other upstream 3566717 40086474 ~ 40105052 (+)
G58324 NA other downstream 212802 43932952 ~ 43935762 (+)
G58522 NA other downstream 666347 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 841627 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 864412 44584562 ~ 44603609 (+)
G58600 plxna3,LOC107734520,LOC107584894,LOC107674285,LOC107743094 other downstream 912600 44632750 ~ 44651967 (+)

Expression


Co-expression Network