AMCG00009658 (camkvl,LOC101077320,LOC105006803)


Basic Information

Item Value
gene id AMCG00009658
gene name camkvl,LOC101077320,LOC105006803
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 43834883 ~ 43852529 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009658
TTGGCACAGATCCATTACTCCACGCTGGCTGCTGCCCAGTCCTGTCATTGCCTTATCAGTATCCGCATCCTGCGGCGGCTGGGTCACTCTCTAACTGGGCCTGGTGGTAAATGCGCCATGCCATTTGGGTGCCTGGCCATCCGAGATGGGCGAAACTACAACAGCCTATCAGAGATCACCGACAAGTATGAGATTGGCCAGATCCTGAGGGCGAAGGAGTTCTGCGAGCTGTGCCTGGCCAAGGAACGTCAGACGGACAAGGTGTTCATCTGCAAGAAGTTCCTCAAGAAAGATGGCAGGAAAAGGCACGCTGGAGGGGCACAAGGGAGGGTCAACCACCCCAATATCCTGCAGCTCATTGACACCTTTGAGACCCGGAAAGAGTACTACATCATCCAGGAGCTAGCGACCGGAGGGGACGTGTTCGACTGGATTCTGGACCAGGGCAACTACACAGAGCGAGACGCTGCCAATGTCATTAGACAAGTCCTGGAGGCCGTGGCCTACCTGCATTCCCTCAACATCGTGCACAGAAACCTCAAGTTGGAGAACTTGATGTATTACAACCAGAACAACCACAACAAAGTGGTGTTGCGAGATTTCTACCTGTCGCGTTTCGAGAACGGGTCGATCACTGAGCCCTGCGGAACTCCCGAATACCTAGctccagAAGTGGTAGCCCGCCATCGATACGGCCGCCCAGTGGACTGCTGGGCAGTGGGGGTCATCACCTACATCCTgcTGTCAGGGAATCCCCCCTTTTACGATGAGACGGAGGAGGAGAACACAGACCTCCACAACCGCATCATCTTCTGCCGGATCGTCTCAGGGGAGTTCGAGTTCGACTCCCCGTACTGGGACGACATCTCTCCTGCAGCCAAAGAGCTGGTGTGCCGGCTGATGGAAGTGGATCCCATGCTGAGAATCACGGCCCAAGATGCCCTCTGGCACGAGTGGATCGCAGGCAATGGGGCGTCCGAGAAGAACCTGAAAGATGGCGTGTGCGCCCAGTTCGAGAAGAACTTTGCCAAGGCAAAATGGAGGAAAGCCATCCGCGTCACCACCTTCATGCAACGCCTCCGAGCCCCCGAAGCCGGCGGGGTGGGGGTGGGCGGGGGTGAGGGAGGTGGCCGCTTGCCCGTCACCCCCCGGACATCCATGAGTGTCTCCCATGAGGTCACTGTTGAAAACAGGCCCGAGGAAGAGGACGCACAACGGGAGGGCGGGAAAAAAGAGCGAGGAACAGCCACTATTCCCAGCAGCCTGTCTGTGGGCATCTCCCCTACATCCACCCCAGACCCCCAGCTGGAGCAGACCGGGCTCCCTTCAGGGAAACTGGGAGAGGATCTGGAGAAAGGAGGTGGTGGAAAGAGCCCCTGGAAAATGGCAGCCAATCTGGGGCCGGAGAAGCCCAGACTTCAGCCCGAGAAGCCCTCCCTGTCTCCTGTGACGGAGACCAAGAAGATCCCCGACCGAGGGACTAAGGTGATCATTCTGGAGCAGACTGCCAGCCCCGGAGACAAGAAAGTGGGGGCCTCCACAGAGACGCCCAGCAGGCGCAAGATGGCGGCCGTGCTGTCTCACTCTGTGGATAAAACAGGAGATCCGGAAAAGAAGACGGCGGGAGAGGCCACGAACAGGGGGGCGGCAGACGACAAGAGAGCCAAAGCGGAGAAAAGCTGGTGCCAAACCCAGGTGCCGGAAACTGTGGCTGAGAAGAGAGTGCCGGTGTGTGCGGAGGGAAGGAGAGGCGGAGGAGGGTCCGCGGAGGCGAGCCCGGGTTGGAAAACGAGCCAGGCGGCGGGGGGCAGGAGTCCTGAACCGGGAACACCCAGGAAGGGGATGGAGGAGCTCGGCGCGGCGAGGGGTTCGCCGGGCACGGGGCGGAAGAAGACAGTGACCATTCAGGAACAGAGCGAAGCTTCCTGTCTTTTTGGGGCATCCgcttcctcctcctgctcccctGCCACCAGCACCTTGGGCCGTGGCGACTGGCAGATGGACAGCGTGATCGAGCAGATCGAGAAGCAGATGGCTGCTGTGCTGGAGAAGATCGAAGGTGACATGCCGTCCCTACTGGAGCAGATCAGCGACAGGCCCGACTGCCTGcgctcccacccctccccaGCCCGGGGGACCCAGACCACCCCCCGGCCCACCCTCCCCCACCTCACCATCCAGCCGCCCAGTGCCCCGCCGCCCACCCCGCCTGGCCCGGGACAGGAAGACGAcggggagagggaggagcagGAAGGTGGGGTCCGGTCCAGCCAATCACCACGAGGGGGCGTGTCGGGAAGAGGCCTATGA

Function

symbol description
camkvl Predicted to enable calmodulin binding activity and calmodulin-dependent protein kinase activity. Predicted to be involved in peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Is expressed in Purkinje cell.

NR:

description
PREDICTED: LOW QUALITY PROTEIN: caM kinase-like vesicle-associated protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009658 True 2310 mRNA 0.61 12 43834883 43852529

Neighbor

gene id symbol gene type direction distance location
AMCG00009655 tbc1d25,LOC104943506 coding upstream 78524 43751483 ~ 43756359 (+)
AMCG00009653 NA coding upstream 86755 43743454 ~ 43748128 (+)
AMCG00009654 NA coding upstream 94020 43736597 ~ 43740863 (+)
AMCG00009656 NA coding upstream 114733 43671769 ~ 43720150 (+)
AMCG00009646 NA coding upstream 410033 43416831 ~ 43424850 (+)
AMCG00009659 uba1 coding downstream 6552 43859081 ~ 43873704 (+)
AMCG00009662 NA coding downstream 27500 43880029 ~ 43890471 (+)
AMCG00009660 NA coding downstream 45337 43897866 ~ 43902765 (+)
AMCG00009661 NA coding downstream 87764 43940293 ~ 43951629 (+)
AMCG00009670 NA coding downstream 126063 43978592 ~ 43992050 (+)
G58291 NA non-coding upstream 153930 43678351 ~ 43680953 (+)
G58214 dedd,LOC108411641,LOC107758014,LOC107699191,LOC107603111 non-coding upstream 510304 43318916 ~ 43324579 (+)
G58215 NA non-coding upstream 523821 43309860 ~ 43311062 (+)
G58195 NA non-coding upstream 585242 43249403 ~ 43249641 (+)
G58178 NA non-coding upstream 621855 43212710 ~ 43213028 (+)
G58304 NA non-coding downstream 21252 43873781 ~ 43875723 (+)
G58317 NA non-coding downstream 57059 43909588 ~ 43915760 (+)
G58319 NA non-coding downstream 68945 43921474 ~ 43926631 (+)
G58467 NA non-coding downstream 316956 44169485 ~ 44169789 (+)
G58510 NA non-coding downstream 472622 44325151 ~ 44325573 (+)
AMCG00009647 NA other upstream 390463 43436990 ~ 43444420 (+)
G57830 NA other upstream 1756642 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 2235759 41596229 ~ 41599124 (+)
G57604 NA other upstream 2840224 40990802 ~ 40994659 (+)
AMCG00009516 NA other upstream 3729831 40086474 ~ 40105052 (+)
G58324 NA other downstream 80423 43932952 ~ 43935762 (+)
G58522 NA other downstream 533968 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 709248 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 732033 44584562 ~ 44603609 (+)
G58600 plxna3,LOC107734520,LOC107584894,LOC107674285,LOC107743094 other downstream 780221 44632750 ~ 44651967 (+)

Expression


Co-expression Network