AMCG00009669


Basic Information

Item Value
gene id AMCG00009669
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44025544 ~ 44051535 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009669
ATGTTCTCTGACGCCGAGAGGGATGACATCCATCAGCTGGCGAGACATCAGATAGCCCGCTTCAGAGAGGAGAGGGCGGCGGCGCAAGGGGCTGATCAAGCAGCCGGCCACGCAGCAAAGAAGAGAGCGCTGGCCGAGTTTGAGGAAGAGTGGGAAAACATtgtggagcaggaggaggaaaacaatgaaTGCGGGGCTGCTGTGTCTGCCTATGGACAGGCCAGTGTGAATATGACACTGGGAGCTATGGACTGTGCTGGGAGTGAGAAGAGACTGTGTCATTGTGTTTCTGAAGACTtgagcagtcaggcctgtagaAGTGGGGAGGACTCAGCTGTAATCTGTGTCAACTCAGGTCTGATTGTAGAGCCCACCCTCTCCATGCTGCCCCCTTCTCCTGTCGTCATCTCTGGAGACCAAGTGACTTTCCGCTGCACTGCCCCCAACCCCCTCTACACCAGCCTTGACTTTGAACTATACCAGGACACTGTTGGATACCAGCACCCCATTGTGACCCAGAGGGCTGAATCTCCACAGACCACAGTGGAGCTGACTGTGTCTAATGTGGAGCCGTCACACCAGGGCAGCTACAGATGCCGTTACAGAGTCCAGGGGAGCAATCAGACGTTCAGCTCAAATCACAGCAACTCCATTAACATCACTGTGGTGAATGTGCAGAAACCCACCATCTCTAGCAGCCCCTCTACAGGAGACTTGACCAAGGGACAGAGCTTCTCCATCACCTGCCGCTCTGCCTCCAAGCACTCCGATGGGAAGCTGAATCTCCTCCAGTCCACAGGGGGCACTGAGGTGAAGGTGGCTTCTCAGTCTGTGCAAGTGGAGCTTTCTGTCAATTTCACGTTTCCCTCTGCAAATTTCTCCAACGATGGGAACTACAGATGCGAGTATGAGACTCAGGTGTCTGGTCATACAGTCAGAACCACTTCACTCAACACAGCTGTCATCACAGTGACAGATGTGAGGCTGGCAGGGGGTGGCTCCTGTGCTGGGAGAGTGGAGGTGTATCACAGTGGAGACTGGGGCACTGTCTGTGAGGATGGCTGGGGATTGCCTGATGCAGATGTGGTGTGCAGACAGCTGGGGTGTGGGGCTGCTGTGTCTGCCCCTGGTGGAGCTGTCTATGGGCAGGGCAGTGGACCCAACTTACTGAGTGACGTGGAATGCGATGGGGGAGAGACTGTGCTCTCTCAGTGTCCTTCTAGGGGCTGGAGGGGTCATAACTGCAACCATGGGAAGGAGGCCTCTGTGATCTGCTTCGGTTCTGGTGCAATAGCAGAGCCCATCCTCTCCCTGCTGTCCCCGTCTCCTTCCTTCACTCTGAGAGAGCAGATTACTTTCACCTGCACTGCCCCCTATGCCCTCTACACCAGCATTGAGTTTGACTGGTACAGGGGCGCTGCTAGAAACCCCATTATGACTCAGAAGGCTGTATCTCCACAGACCACTATGAAGCTGAATGTGTCTAATGTGGACCCGTCACACCAGGGCAGCTACAGCTGTCAGTACAGAGTCCAGGGGAGCTCAGGGAACATCAGCTCAAATCACAGCCACTCCATTAACATCACTGTGGTGGATCTATCCATTCCACAAATCCACATAAGTGAACCTACTGGACACCTGACCAAGGGACAGAGCCTTAATATCAACTGCTCCACTGCACCGCAGTACCCAGGAGGCACCTTCAAACTCCTCCACTCGTCATTGTCAGGGAGTCAGTGGTTGCCAGCCACAAACCACATTGCAGTCTTCAAGATCCATGCTGTTACCTATTCCCACGATGGGAATTACTCCTGTCAGTACAGCACCCAGGTGTCTGATGTGAGGCTGGCAGGGGGTGGCTCCTGCGCTGGGAGAGTGGAGGTGTATCACAGTGGAGACTGGGGCACTGTCTGTGAGGATGGCTGGGGATTGCCAGATGCAGATGTGGTGTGCAGACAGCTGGGGTGTGGGGCTGCTGTGTCTGCCCCTGGTGGAGCTGTCTATGGGCGGGGCAGTGGACCCATCTTACTGAGTGACGTGGAGTGCGATGGGGGGGAGACTGTGCTCTCTCAGTGTCCTCCTAGGGGCTGGAGGAGTCATAACTGCAACCATGGGAAGGAGGCCTCTGTGATCTGCTTTGGTTCTGGTAGGTTTCAACTGGCACTGCTAACGTTTGACAGAGTAAGCGGTGTCATTCATAAGCCTTTAATCTCCCTGCTTTCCCCTGTGACTGCCCTCCTCCCTGGAGAAAATATCACTCTGACCTGCACTGCCCCCACCAATCTTTACGCCAGCATTGACTTTGACTGGTACAGGAGCACTGCTGGACACCCCATTGTGACCCAGAGGGCTGAATCTCCACAGACCACAGTGGAGCTGACTGTGTCTAATGTGGACCTGTCACACCAGGGCAGCTACAGCTGTCGGTACAGAGTCCAGGGGAGCTCAGGGAACATCAGCTCAAATCACAGCCACTCCATTAACATCACTGTGGTGGACCTTCAGAAACCCAGAATTAGCCTTAGCGACCATAACGGAGAGGTGACCAGAGGTTACAGCTATGTCATCACATGCTCCACCAGGCAGCACTTCCCAGGTGGAACCTTTCATCTGTTGATCAATGGAAAAGTGATTCGTTCAGCCAACACCGACGGCTCCTCGGCCAGCTTCTCCTTTCCTACTGCGGACTTCATGCATGCGGGGAAATACAGTTGCCTCTATGACACCCAAGTGTCCGGTCGCCAGTTCAGCTCCTTGGAAAGTGAACATAAGTCCGTCTCTGTTAGAGGTGTGCTGACAACGTACACACCGCAAGCGGCCAGCTCCAATGAGTATGAGGAACTGGCAGTGGGTCCCGGGAACACAGAGGTTGTCTCTGAGAAGACCGACGAGACACAACCACTAGGGGAAGACAGAATattaaatttTGCATTCCCATCATGTGCCACAGTGTCCTGGCAGCAGTGGATCCACGTCTTCACCCTAAACATTACTCACTTTTGTggctttcttccttttcttacACATCACAAGGATGATGACAAGGAGTGTCACCACCACCAACAGCACCGAGGTCACCCCGGACACGACTGGGAGGAATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009669 True 3102 mRNA 0.54 14 44025544 44051535

Neighbor

gene id symbol gene type direction distance location
AMCG00009667 NA coding upstream 3290 44013726 ~ 44022254 (+)
AMCG00009668 NA coding upstream 12244 44006914 ~ 44013300 (+)
AMCG00009670 NA coding upstream 33494 43978592 ~ 43992050 (+)
AMCG00009661 NA coding upstream 73915 43940293 ~ 43951629 (+)
AMCG00009660 NA coding upstream 122779 43897866 ~ 43902765 (+)
AMCG00009676 NA coding downstream 40005 44091540 ~ 44099575 (+)
AMCG00009675 NA coding downstream 52261 44103796 ~ 44112657 (+)
AMCG00009674 NA coding downstream 61876 44113411 ~ 44122931 (+)
AMCG00009673 NA coding downstream 76748 44128283 ~ 44142154 (+)
AMCG00009679 NA coding downstream 109047 44160582 ~ 44161239 (+)
G58319 NA non-coding upstream 98913 43921474 ~ 43926631 (+)
G58317 NA non-coding upstream 109784 43909588 ~ 43915760 (+)
G58304 NA non-coding upstream 149821 43873781 ~ 43875723 (+)
G58291 NA non-coding upstream 344591 43678351 ~ 43680953 (+)
G58214 dedd,LOC108411641,LOC107758014,LOC107699191,LOC107603111 non-coding upstream 700965 43318916 ~ 43324579 (+)
G58467 NA non-coding downstream 117950 44169485 ~ 44169789 (+)
G58510 NA non-coding downstream 273616 44325151 ~ 44325573 (+)
G58513 NA non-coding downstream 276736 44328271 ~ 44360062 (+)
G58527 NA non-coding downstream 361737 44413272 ~ 44483247 (+)
G58666 NA non-coding downstream 841310 44892845 ~ 44893078 (+)
G58324 NA other upstream 89782 43932952 ~ 43935762 (+)
AMCG00009647 NA other upstream 581124 43436990 ~ 43444420 (+)
G57830 NA other upstream 1947303 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 2426420 41596229 ~ 41599124 (+)
G57604 NA other upstream 3030885 40990802 ~ 40994659 (+)
G58522 NA other downstream 334962 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 510242 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 533027 44584562 ~ 44603609 (+)
G58600 plxna3,LOC107734520,LOC107584894,LOC107674285,LOC107743094 other downstream 581215 44632750 ~ 44651967 (+)
AMCG00009706 pim1 other downstream 698641 44750176 ~ 44760058 (+)

Expression


Co-expression Network