AMCG00009686 (taz)


Basic Information

Item Value
gene id AMCG00009686
gene name taz
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44314972 ~ 44322797 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009686
GCGCTGTTGTTCGACTCTGCTTTAGCTGTAATCGGAAGGTGAGATTTATGTTTTCTCATCTTTAGTGTCATCTAGGAGATTCAAATTTCAGTTGGTTACATTTAAGACTACTTTAATCAGGATGCATTGAAAAAGAGAGGGATGCGGTATTAAGACAATACAAAACTGGTGTTTTGCATTGGTTAGGCCtgcaggagagcaggagagcGGCAATGCCCCTGGAGGTGAAATGGCCCTTTCCGCAGCGTCCCCGTCTGCCCTGGAAGATCTCCAGCACTGTGGTCATGGGGTTAGTGGGCTCCTACAGTTACCTCTGGACCAagtACTTCAACTGTGTGACCGTCCACAATCAGGATGTCCTCTTTGATCTGATTGACAACCGCCCCCCCAGCACCCCCCTCATCACCCTCGCCAATCACGAGTCTTGCATGGACGACCCTCACCTGTGGGGTATTCTGAAGCTGCGTCACCTCTGGAATCTGAACAAGATGAGGTGGACTCCCGCAGCCTCGGACATCTGCTTCACTAAAGAGCTGCACTCTCGCTTCTTCAGCCGAGGGAAGTGTGTCCCAGTGTGTCGAGGGGATGGGGTCTACCAGAAGGGAATGGACTTCATTCTGGAGAAACTCAACAGTGGGGAATGGATTCACATCTTCCCAGAGGGGGTGGGTCGCTTGATAGCAGAGTGCACTCTGAACCCGGTGATTCTTCCTCTGTGGCACGTGGGAATGAGTGACATTCTTCCAAACAATCCTCCCTACATTCCTCGTGTTGGTCAGAAAATAACAATCCTGGTTGGGAAGCCATTCACCTTGAAACACCTGGTGGAGTCTCTGAAATCCGAAAACAAGAATCCGGTTGAGATGAGGAAAGCCCTGACCGACTTCATCCAGGATGAGTTCCGCACCCTGAAGACCCAGGCCGAGTCTCTCCACCAGCGGCTACAGACCACCAGGCAATAGCCGGGCTTCGGACGAGGCTCCTGTCCCTCGCTGCATGCGTGCATGTCGGGGCGGGAAGAGGTGAAAGGAGGCCACGCGAAGCGTGTATTCACAAACCAGCCGGCGTTTGTACCGGTTCCTTTACTGAATCCGACGCACAACGGTCCGTAGCTCAGCATTCAAAATCTATGGCCACAAAAGGACTCTAGTGAAGATTCCCCCTGGCTGTGCAATTTAAGTCTTGGTTGATTTCAATGGTGTTGCGACACATTGAAGTGATAATGCTTGTTAAGGGAAAAGGTGTATTATAACCTTTTATTCAGTACATCAGGTATTTGtttagtaaaaaacaaaacacagaagttTAGCCAAGCCTTTGGTCCAGAAGCCTGGCTGATTTGAGAGAGCAATCAAAGAAATGAAGGGAAAGGACTCTGCGGGCTCTTGACCTTCAAGCCAAAGTCTACCGTTTTTAACCTAACCCAGCCAATGTGTAATTTTCTTAATGTGTATGTAATGATATAATAATGAAGAAGGAATGTGTGGAGCTCATCTCCAGTCAGTCGAGTCTTTCAGGTTTTTAGCGGCATGCTCACAGATTCCTTCTGTGAAAACTGATCTGGAACAGGTTGACTTAAGAGTCTGTCTGCCATCGCCACCTGCCATTAAAACTGCAACGAGAGCTGCGTTGACCCCGGTCcgtttctcaattaaatcacagagaCAGCCGAGCCTATCTAGAACTGTTGCAAAGATTGATCATGGCTAACCAATAACttaatgttttttgctttgttttccctCACGTTGTTTCcctgtttgaaatgtaatattgaagTATGCAATGTGGATTTAGCAGGGACAAAAAGCACAAACCATGAAACTGCAGTATGAACAGCCACGCATGGGCATGTGTGCTCCTATGCAGAACCTCACACTATAATAGCTGGAGAATGAGTCCTTGTCTTTGGCTTGCCTAGTATATCCTGCAGGAGCAGTTGGTCTGTCTGAGTGGCTTTTTCTACTCTGCACCACACCGACAATCAAAAGCCTACTTGACACTCTGAGTGACTGGACGAGTTTTATAGAGGCATTCACCCAACTGCAATGTTGACATGGGCAAGTTTTGTAATGTAGCGGTTTTCACACGACACCATCTAATCCCGGGTTGAGTGGATCGTGTGCCGTGTTGTTCACGTTGACCTTGTGCTACAATACACGGGTTGAGATTTGTCCCAGGGTTGGATTCGACCGTATTCACACAATATATCATTAACCCAGGTCGACCACCAAGTATCTCCTCAAGCTCTTTATAAAATGACAGGTTTTTTGCTCACTGCTCGATCGATTAACATTGTAATgtttaacttaattttttttctttgttttaattttcttgtgGCACTGAGACTCTCTTCTGTCGGACCCGGCGCTCCACAAGTGTTGTGTGAacacttttaaattgttttgttccATCCATCTGTCGCTGGATATTTTAAGTTGCCCACAACATGACCAACTCCTGGACTTCACTCTCACACCACAGCActcttccagtttttatttacagacaCACGCAGACTCATGACCCTTGCCACTTGTTGTTTATGTTGCGTAACCCTGTACAATTAATATGAACGTGTTTAACCCTGAGGTGAGGTTTTGTCCCGGGTGGGAAAGCTCGACCCTGGTCTCTATCAGGTTGAGTTCACCCTGGCTTCAGAGTTTCATCTTGGGTTGAACATGACAATGTGAAAGCACTTGATTTTCGCTCCGGGGGTCGTCCCTGGTTCAACTGtctagtgtgaaagcagcttCTTTGTGTTTAAAGAATGGATTcagtctaaataaataaaaatattattctcCTTGAATAACAAAGTCATTATCTTTAAATCTGGGGTGGAAGGGTGTGGGTCAAGGTGTCAAAATGTAACCAGCCAACCTACAGAGACTGTTAACATACTAACAAAGTCACGTGACTCCTCAGTGTTTTCTCATAAGCAAAGAAAAATCccaccactttttttttcctgtgtggaAAGGCTGgttattttttccatgtataAACCTGTGATTCAGGACTTGGTAATTGAATACAGAGACCCAAAATGTAAACCACAGCAATCTGATCCTAATTAATAGTGGAGAATGAGGGGGAGCTCAACAGTGTCTGCCACAGGAAGAATGTTACTGGGGATTCTgactattttactttttcattttctatatGAAAGATTTTATAACATGGATGTATTTACCTTGATCACGTAGGCCATGGTCTATAGATAGATGtattatgtaactgaatgaaGACATGAACTGCCTTAATGGAGTCAATCCtgctgaattgaattgaacCTACATTGTTCCTACTGTATCAATAAAGGATGGACATTTATGATTATAAAAGCAGTGTATCTGTGAGTCAAGCTTTGGGCTTCTGTGTACAAGGGGTGGGTGAGGTTTCATATCTCTTTTGTGCATATCCTTCATTTTTTTGCAGGCTTCTGCCCCTTTTTTGCTggaaagattttattttggtagGGAGATTTGGAAGTTGTGAAT

Function

symbol description
taz Predicted to enable 1-acylglycerophosphocholine O-acyltransferase activity. Involved in several processes, including cardiolipin metabolic process; mitophagy; and spermatocyte division. Predicted to be located in mitochondrial inner membrane and mitochondrial outer membrane. Predicted to be active in mitochondrial membrane. Is expressed in alimentary system; respiratory system; and urinary system. Human ortholog(s) of this gene implicated in Barth syndrome and dilated cardiomyopathy. Orthologous to human TAFAZZIN (tafazzin, phospholipid-lysophospholipid transacylase).

NR:

description
Tafazzin

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0045823 positive regulation of heart contraction biological_process
GO:0001947 heart looping biological_process
GO:0031307 integral component of mitochondrial outer membrane cellular_component
GO:0016746 transferase activity, transferring acyl groups molecular_function

KEGG:

id description
K13511 TAZ; monolysocardiolipin acyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009686 True 3509 mRNA 0.45 10 44314972 44322797

Neighbor

gene id symbol gene type direction distance location
AMCG00009687 NA coding upstream 823 44303226 ~ 44314149 (+)
AMCG00009680 NA coding upstream 33785 44265059 ~ 44281187 (+)
AMCG00009682 si:dkey-96f10.1,LOC106609077,LOC108427753,LOC105900165,LOC108276060,LOC107704228 coding upstream 60925 44235551 ~ 44254047 (+)
AMCG00009684 NA coding upstream 92759 44221359 ~ 44222213 (+)
AMCG00009681 NA coding upstream 109718 44199516 ~ 44205254 (+)
AMCG00009685 NA coding downstream 41734 44364531 ~ 44372415 (+)
AMCG00009688 NA coding downstream 50904 44373701 ~ 44381036 (+)
AMCG00009689 NA coding downstream 59760 44382557 ~ 44386172 (+)
AMCG00009698 NA coding downstream 116777 44439574 ~ 44442056 (+)
AMCG00009696 flna,LOC108436314,LOC107712729,LOC101154674,LOC107570276 coding downstream 127306 44450103 ~ 44482061 (+)
G58467 NA non-coding upstream 145183 44169485 ~ 44169789 (+)
G58319 NA non-coding upstream 388341 43921474 ~ 43926631 (+)
G58317 NA non-coding upstream 399212 43909588 ~ 43915760 (+)
G58304 NA non-coding upstream 439249 43873781 ~ 43875723 (+)
G58291 NA non-coding upstream 634019 43678351 ~ 43680953 (+)
G58510 NA non-coding downstream 2354 44325151 ~ 44325573 (+)
G58513 NA non-coding downstream 5474 44328271 ~ 44360062 (+)
G58527 NA non-coding downstream 90475 44413272 ~ 44483247 (+)
G58666 NA non-coding downstream 570048 44892845 ~ 44893078 (+)
G58660 NA non-coding downstream 595246 44918043 ~ 44921637 (+)
G58324 NA other upstream 379210 43932952 ~ 43935762 (+)
AMCG00009647 NA other upstream 870552 43436990 ~ 43444420 (+)
G57830 NA other upstream 2236731 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 2715848 41596229 ~ 41599124 (+)
G57604 NA other upstream 3320313 40990802 ~ 40994659 (+)
G58522 NA other downstream 63700 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 238980 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 261765 44584562 ~ 44603609 (+)
G58600 plxna3,LOC107734520,LOC107584894,LOC107674285,LOC107743094 other downstream 309953 44632750 ~ 44651967 (+)
AMCG00009706 pim1 other downstream 427379 44750176 ~ 44760058 (+)

Expression


Co-expression Network