AMCG00009687


Basic Information

Item Value
gene id AMCG00009687
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44303226 ~ 44314149 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009687
CGTTGGACACGTTTCACTTGCTcatcatttttcattaattagGTTCACCGGAGGGATTCAGAGCTGTTTGGAGTTAAAGGGAGAAACTCGAGGGACAGTTGGCGAGATAATGGGAGATGTTAAAGTCCATCAGCCAGTGTCTCCAGTGAGGAACTTTTTTGCTGGGGGTGTCGGAGGAGCGTGCTTACTGCTGGCCGGACACCCGCTGGACACCATTAAGGTTCGACTACAGACTCAACCCAAAGCTGCCTATGGACAGCATGTTGTCTACACAGGGACCATGGACTGTCTCAGGAGTACGGTGGCTCGAGAGggcaTGCGGGGGCTCTATAAAGGCATGGCAGCCCCACTGGCTGGGGTGTCCCCCATGATGGCCATCGGTTTCTTTGGGTTCGGTCTGGGGAAGCGACTGCAGCAGCGAGACCCGGACAGCCCCCTCACATACCCACAGATCTACGCAGCTGGGATGCTGTCGGGCATTTGCACTACGGTCATCGTGGCACCGGGGGAGAGGATTAAGTGTCTTCTGCAGGTGCAGTCTACCTCCGGCCTGAGGAAGTATTCTGGTCCAGTGGACTGTGCTGTCCAGCTGTACAAACAGCAGGGGATTCGAAGTGTTTACAAGGGCACCGTCCTCACGCTCATGAGAGACGTGCCCTCTACCGGTGTCTACTTCATGAGTTATGAGCTGTTGAAGAACACGCTGACTCCCACAGGTCAGAGCGTTGACGAGCTGAGCATTCCCAGAATCCTCTTTGCTGGGGGCATGGCGGGCATCTGTAACTGGGCCGTGGCGATACCCGCTGACGTCCTCAAGTCCATCACCCAGACAGCCCCGGAAGGGAAGTACTCTGGATTCCGGGATGTACTCCGCGAGCTGGTGAGAGAGGAAGGCCTGCGCTCCCTGTACAAGGGCTTCAGTGCCGTGATGCTGCGAGCCTTTCCTGCCAACGCGgcTTGCTTCTTGGGGTTTGAAGTCTCTCTGAAGTTCCTGAACTGGCTGGCTCCAGATTACTGAAGGCAAAGGTCATGACCTCCTTGACACCTGCCAGTCCTCGTGTTCAGCCCAATGAACTTTTACTGGAGATCCTTAAAATCAAATCCTGTTCATAGTAGAacaggattattattttaaccaaGGTGCCCCTTAACCAATTAATCCATAAAGTCAAAgtctataaaaaaaacttgGCCTGTGGATGTTTCAAAACAATGGTTTattaattatagaaaataatcaTCAACAATTGCATACAGATTGAATTGcaaatgtttgttaatttgtatgTGCACTGGATAGATTCATGTGtcttaattgttgtttttacatgttttatggtacttctatttttaaagtatgttaatgtatttgaaaatgtgcagaTATGACCAcgaatgtgttatttaattgtcTGAGTCTGATAGGTGTGTGCAACAGCAAAGGCTGTACTTCAGAAGTTGTTTATAACATGGTCAACAGTGTGAACTGTTTTAAACTGCTTTGTTTTGGAAtgcttaaacaaataaaaaagacccTTCCTTGGCAATAAACTATTGCTTGTAAAGA

Function

GO:

id name namespace
GO:0006810 transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15109 SLC25A20_29, CACT, CACL, CRC1; solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009687 True 1567 mRNA 0.48 9 44303226 44314149

Neighbor

gene id symbol gene type direction distance location
AMCG00009680 NA coding upstream 22039 44265059 ~ 44281187 (+)
AMCG00009682 si:dkey-96f10.1,LOC106609077,LOC108427753,LOC105900165,LOC108276060,LOC107704228 coding upstream 49179 44235551 ~ 44254047 (+)
AMCG00009684 NA coding upstream 81013 44221359 ~ 44222213 (+)
AMCG00009681 NA coding upstream 97972 44199516 ~ 44205254 (+)
AMCG00009679 NA coding upstream 141987 44160582 ~ 44161239 (+)
AMCG00009686 taz coding downstream 823 44314972 ~ 44322797 (+)
AMCG00009685 NA coding downstream 50382 44364531 ~ 44372415 (+)
AMCG00009688 NA coding downstream 59552 44373701 ~ 44381036 (+)
AMCG00009689 NA coding downstream 68408 44382557 ~ 44386172 (+)
AMCG00009698 NA coding downstream 125425 44439574 ~ 44442056 (+)
G58467 NA non-coding upstream 133437 44169485 ~ 44169789 (+)
G58319 NA non-coding upstream 376595 43921474 ~ 43926631 (+)
G58317 NA non-coding upstream 387466 43909588 ~ 43915760 (+)
G58304 NA non-coding upstream 427503 43873781 ~ 43875723 (+)
G58291 NA non-coding upstream 622273 43678351 ~ 43680953 (+)
G58510 NA non-coding downstream 11002 44325151 ~ 44325573 (+)
G58513 NA non-coding downstream 14122 44328271 ~ 44360062 (+)
G58527 NA non-coding downstream 99123 44413272 ~ 44483247 (+)
G58666 NA non-coding downstream 578696 44892845 ~ 44893078 (+)
G58660 NA non-coding downstream 603894 44918043 ~ 44921637 (+)
G58324 NA other upstream 367464 43932952 ~ 43935762 (+)
AMCG00009647 NA other upstream 858806 43436990 ~ 43444420 (+)
G57830 NA other upstream 2224985 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 2704102 41596229 ~ 41599124 (+)
G57604 NA other upstream 3308567 40990802 ~ 40994659 (+)
G58522 NA other downstream 72348 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 247628 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 270413 44584562 ~ 44603609 (+)
G58600 plxna3,LOC107734520,LOC107584894,LOC107674285,LOC107743094 other downstream 318601 44632750 ~ 44651967 (+)
AMCG00009706 pim1 other downstream 436027 44750176 ~ 44760058 (+)

Expression


Co-expression Network