AMCG00009695


Basic Information

Item Value
gene id AMCG00009695
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44483967 ~ 44490079 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009695
ATGCGAGCCGTACATCAAGTTTCCAGCCAACGCCCTGTTACTCAGCTGCGGCTCATCGACCGGCCCGATCCCACATCTGGCAAGAAAACAGCCTGCATCCGAGAGTCTCTCTTCCCTGTAGACATGGCCGCCCTCAGCAATAAGTCCGACAAGGAGATCAGGCAGCTCCTGGATCAGTATGGGATAAAGCACGGCCCCATTGTTGAATCCACCCAAGGCCTGTACGAGAAGAAGCTGCAGGAGGCGATGGCCAAGGACAAGAAGGTGAAGACTTCCTCGGACAAGACCTACTACAGGGAGGAGCAGGAAGAAGTCACATACCTGCATTATCGCCAGCCGATCAGAAATGATGATTTTGAAGATGATGGAAACTACTCTTCCATCGAGAGACAATACACCACCTCCGATTCCTACAGGGAACCGGTTAGGGAGTACGAAGACAGACCGCTGTCTGTGATTAGGTTTGTGATGGCTGGGCTTCTGTCTTGCAGCGGGAGGCAGTACAGCAGCACGGACTCGTACAGTGACCCCAGGAAACTGTATGGAAATGCGGCGCGGATGTACTTCAAAGCCACAGAGGCCACCCCCCGGGACGGGCTGCACTCGAGGCCGGTCCCAACAAAGTCCTCCGCAGGACAGACAACCAGGTCCGCCCAGGAGAAGCCTTCCCAGGAGTCGAGACTCATCCCCCTGTGGCTCCAGATCTTGGCCTTCCTGCTGGTGGCCAGCTTCCTGTACTACGTGTTCACCAGCATGGAGACGCCTGAGCAAAACCCCTTCAACAAGATCAACTGAGGGCAGTCCATACGATTGGGTCACACCCCCGCTGTCTGCCTCAGCCGTCGCCCGACTCTCCGCTTCACTCCAGACGACCCGTCGCAAGACCCAAGTCCCTGCggctgctttttttaaatgtacacgTGAGGTTGCCAAGATGTATACCAAGGTATATAAAACGCAGTGTAATGGGGCGGACAGTCGActgcctttttaaattaaaaccaatcCTCAATCACGCCCGATTCAGAACCCCCGCCCACAGAGTGACTGTCAATATAGTGTCTCGGAGGCACAGCTGAGCAGAGGCTGCTCTAGTCGTCCTGGGGTCCCTTTGAGCATCGACATGCCTGCCTGTTTTTAAACTTGTGGCCTCAGCCTGTATTTTATTCGGTCCTGAACAAAGCTTTTCCTGGACACATCCCTTTCGCTGAGCGCAAGAGGTACTGCTGCACTTTGTAAATACGGACACGGGTATCATGCCGTGGAATTCAAACCAGCGCTTCACTTTAGACAGCATCAATAGAGACCAGACTGCATGACTTGACCTCCAGGCTGCAGGTGTGTCCTTCATCCTAGAACACTCTTGCTCTTTTTGAGCCCTAATAGGGTCAGATTTCAGAACTAAGTTACTCCCCGTTCCCTAAACCTACAACTCTCTGCGTAACAGAAGTGCCTTTTTGTTGATGGAGACCTTCCTCTCTGCCCTCCGGTTACCGTTGAACTAGATTTGGTGTCATGTCCCCCCGTTAGATTTGAGCCACATCCAAAGGGCAGTCCCAGGGGTGGGGAGGTAGGATAGGGTCCCCATGACATTGACCCTTTCTGACGAGACGGGGGGCTGTTTCCTGGTGCTTCCGCTGTAATAAACTCACagctgttcattttctttaaataatgcatataaaAATCAAAGGGAATACTTTGGGAACCTTGGGACCTCTAAAAAGTGGCAAAACTATGGACCTAATAGATAAGATTAAAGGACAAATTGTATTGGGTATTGATAATAGTTTGGGGCAGGTTGAtgtgcttttatatatttatatatatatatatatacaataaaaaacaaaactgattttgcTATCTgatataaatgttttgctttgatttccTATACTCCTGTATTACAGATGTGTGTAATGCTGTGGTTTGAAACTGAactgattacattttcaagaagataaatacatgcatgtgtatatagtgtgtgtatatgtatacatatatatgacatGTCTGCTGTGAGGATCCCTGTTACCTGGTCTGAAGAGAGAGGTCTGCAAACCCCTTGTTTAAATTGGTGTCTTTAAcacaaaaatctgttttaaaatacatacattagaCTCATTAATGACGcagaataatatttttaaagtttcattATCGTTCTGCATTGACGTGTCCTGTTCTTAAACATTCCCGTGTGCTAATGATCAAACCGCGCAGTGGCAGGATCAGGGACATTTGAACTCATTGATATTGCTATGCAAAATACAGAGAGGCTCATTTTCAACAGCCGTGTGACAGTTGTCATGTGTAATATTGGAGAACAGCAGTtctgttttgacatttttaaatgtttgaattattcATTTGGTGCCTCTATATAATTggtattttatcttttaatttgtcCTGATGTCTGACTTTTCAAACAATAAACAACCATTTCTACatttaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009695 True 2464 mRNA 0.46 9 44483967 44490079

Neighbor

gene id symbol gene type direction distance location
AMCG00009696 flna,LOC108436314,LOC107712729,LOC101154674,LOC107570276 coding upstream 1906 44450103 ~ 44482061 (+)
AMCG00009698 NA coding upstream 41911 44439574 ~ 44442056 (+)
AMCG00009689 NA coding upstream 97795 44382557 ~ 44386172 (+)
AMCG00009688 NA coding upstream 102931 44373701 ~ 44381036 (+)
AMCG00009685 NA coding upstream 111552 44364531 ~ 44372415 (+)
AMCG00009699 NA coding downstream 2616 44492695 ~ 44502439 (+)
AMCG00009703 plxna3 coding downstream 151871 44641950 ~ 44642771 (+)
AMCG00009702 NA coding downstream 157937 44648016 ~ 44653748 (+)
AMCG00009701 plxna3,LOC106572068 coding downstream 170735 44660814 ~ 44666978 (+)
AMCG00009711 NA coding downstream 219760 44709839 ~ 44712088 (+)
G58527 NA non-coding upstream 720 44413272 ~ 44483247 (+)
G58513 NA non-coding upstream 123905 44328271 ~ 44360062 (+)
G58510 NA non-coding upstream 158394 44325151 ~ 44325573 (+)
G58467 NA non-coding upstream 314178 44169485 ~ 44169789 (+)
G58319 NA non-coding upstream 557336 43921474 ~ 43926631 (+)
G58666 NA non-coding downstream 402766 44892845 ~ 44893078 (+)
G58660 NA non-coding downstream 427964 44918043 ~ 44921637 (+)
G58668 NA non-coding downstream 432005 44922084 ~ 44923700 (+)
G58776 NA non-coding downstream 653096 45143175 ~ 45143472 (+)
G58792 NA non-coding downstream 704444 45194523 ~ 45198264 (+)
G58522 NA other upstream 76399 44386497 ~ 44407568 (+)
G58324 NA other upstream 548205 43932952 ~ 43935762 (+)
AMCG00009647 NA other upstream 1039547 43436990 ~ 43444420 (+)
G57830 NA other upstream 2405726 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 2884843 41596229 ~ 41599124 (+)
AMCG00009694 LOC103385381 other downstream 71698 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 94483 44584562 ~ 44603609 (+)
G58600 plxna3,LOC107734520,LOC107584894,LOC107674285,LOC107743094 other downstream 142671 44632750 ~ 44651967 (+)
AMCG00009706 pim1 other downstream 260097 44750176 ~ 44760058 (+)
G58747 NA other downstream 565986 45056065 ~ 45057874 (+)

Expression


Co-expression Network