Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00009702 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 44648016 ~ 44653748 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0048755 | branching morphogenesis of a nerve | biological_process |
| GO:0060272 | embryonic skeletal joint morphogenesis | biological_process |
| GO:0008045 | motor neuron axon guidance | biological_process |
| GO:0048675 | axon extension | biological_process |
| GO:0048696 | regulation of collateral sprouting in absence of injury | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00009702 | True | 1011 | mRNA | 0.65 | 6 | 44648016 | 44653748 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009703 | plxna3 | coding | upstream | 5245 | 44641950 ~ 44642771 (+) |
| AMCG00009699 | NA | coding | upstream | 145577 | 44492695 ~ 44502439 (+) |
| AMCG00009695 | NA | coding | upstream | 157937 | 44483967 ~ 44490079 (+) |
| AMCG00009696 | flna,LOC108436314,LOC107712729,LOC101154674,LOC107570276 | coding | upstream | 165955 | 44450103 ~ 44482061 (+) |
| AMCG00009698 | NA | coding | upstream | 205960 | 44439574 ~ 44442056 (+) |
| AMCG00009701 | plxna3,LOC106572068 | coding | downstream | 7066 | 44660814 ~ 44666978 (+) |
| AMCG00009711 | NA | coding | downstream | 56091 | 44709839 ~ 44712088 (+) |
| AMCG00009708 | otud5,LOC106571839 | coding | downstream | 84931 | 44738679 ~ 44746329 (+) |
| AMCG00009707 | LOC107653423,LOC107584890,LOC107743096,LOC107674336,LOC107734533 | coding | downstream | 110288 | 44764036 ~ 44768228 (+) |
| AMCG00009709 | NA | coding | downstream | 115126 | 44768874 ~ 44780968 (+) |
| G58527 | NA | non-coding | upstream | 164769 | 44413272 ~ 44483247 (+) |
| G58513 | NA | non-coding | upstream | 287954 | 44328271 ~ 44360062 (+) |
| G58510 | NA | non-coding | upstream | 322443 | 44325151 ~ 44325573 (+) |
| G58467 | NA | non-coding | upstream | 478227 | 44169485 ~ 44169789 (+) |
| G58319 | NA | non-coding | upstream | 721385 | 43921474 ~ 43926631 (+) |
| G58666 | NA | non-coding | downstream | 239097 | 44892845 ~ 44893078 (+) |
| G58660 | NA | non-coding | downstream | 264295 | 44918043 ~ 44921637 (+) |
| G58668 | NA | non-coding | downstream | 268336 | 44922084 ~ 44923700 (+) |
| G58776 | NA | non-coding | downstream | 489427 | 45143175 ~ 45143472 (+) |
| G58792 | NA | non-coding | downstream | 540775 | 45194523 ~ 45198264 (+) |
| AMCG00009700 | plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 | other | upstream | 44407 | 44584562 ~ 44603609 (+) |
| AMCG00009694 | LOC103385381 | other | upstream | 77485 | 44561777 ~ 44570531 (+) |
| G58522 | NA | other | upstream | 240448 | 44386497 ~ 44407568 (+) |
| G58324 | NA | other | upstream | 712254 | 43932952 ~ 43935762 (+) |
| AMCG00009647 | NA | other | upstream | 1203596 | 43436990 ~ 43444420 (+) |
| AMCG00009706 | pim1 | other | downstream | 96428 | 44750176 ~ 44760058 (+) |
| G58747 | NA | other | downstream | 402317 | 45056065 ~ 45057874 (+) |
| AMCG00009761 | NA | other | downstream | 854019 | 45507767 ~ 45511037 (+) |
| AMCG00009759 | NA | other | downstream | 906229 | 45559977 ~ 45572255 (+) |
| AMCG00009760 | NA | other | downstream | 919522 | 45573270 ~ 45575964 (+) |
