G57775


Basic Information

Item Value
gene id G57775
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 41815921 ~ 41817795 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU72233
atttttaacattttattgtggACCGTAAACCATACTGAGGCAGTGCAAACTAAAGCCGGTTTGCATAACATGGGAGGATAAGGATCTCTCACACAGCATTGAATTagcaacacaaaataacatAGTAAATGTACTGGAAcagttaacattaaaataaaaactctccACACATGAACTGCACCCATCCATACGCTTGACTAAACCGGTCTGTGATCACCAAACTACAGAGAGAAATTCGCAGGATTTTGTCACAAGTCTGAAAAACTGATGGACAGCAGTAGTGTAGGTTTACTGGAGAGGAATAGGTATTTGCCTGTATGCAAGCAGTTTAATAATCATGCATTCCTGTAGAAGGGTATACTCCCAGCTTGCTTAAGGAACAAATGCTTACTCATTTGTCTAGCAGCCAAAAaggcagaacaaaaaaaaatccaaaaccGAAGCAGTGATAATGTAAGTGCACTCACTACCCAAGCAGTACAAATCACACTACTGCAATGTTCCCAATGTTCTGAACTAGCAAATCCATTCCCGACTACAAGCAGTGAGCATTTTTTACTTGGAACTTATGAAAACACCTTTAAACTGATCGGGTCACGAACAGTCTAGCAACAATCATTTAAGACCATCATTTCCCTAGAGGAGGAAATGAGTCGAGCTTTCTCGAGAACCACGGTCACACACTAGGACCGCTAAATAATCTGGAGACAGAAATCCAAAGATTTTAAGACTCGACACTGTCCCCTTCTGTACAGGCATAAATCACAGCAGACACCTGAAAGTATGGACAGACTTCTCTGGAAAATAATCAAAGTACACTAGAGCTTTGAAATGGATGAAGAAACAAGATTAATCCAAGCGCAACCAGAAGCAATGGGCTAAAGATTATAGAAGAGAGAGACAACTGCAACCACTGCAAGGAATGCATTACCAAGTCTAGCTGCCTTGTTTTGGAATGGGACAACCGAAATGTGCGAGATAAGCGAGAAACCCGAATCTGGGCATCCAAATTCATTAGTCCCACTTCTCATTTTGCACAAATCTCTGCCCTTTGCCAATAAAGGGATTTACTCTGATCAAGaagctgcagagagatcaatgAAGTGGTTGACTTTACAGAAAAGCTTCCTCACACTGTACAGGGtttggagagagaagagggggggGGAATGACTCTATGTAATCTTTATTATGAATGGAATGTGCTTTACACAAGTGTGGTCAGAAGGGGAACAGACTCCtgtacacattacatttcaaggGACAGATGcctaaagttttgatttggagAGGGCCGTGAAAACCAGCACTGAAGGGGATAGGTGGAATTTCCGCTCCTCAGTTAGCGAAGGTCGACCGGACGGCCGCGACAATGCACTTGGCGCTGATGCCATACAGGTCGAGGAGCTCGGTGGGCTTGCCGCTGCGGGGGACTTGTGTCACCGCCAGCATCTGCACGAGAATATCAGGCTCCTCAGCCACCGCGCTGCACACCGCCTCCCCAAGGCCACCTCTTTGTAGTGGTCCTCCACCGTGATGATTCGGCCTCCGGTAGCTTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU72233 True 1561 lncRNA 0.45 2 41815921 41817795

Neighbor

gene id symbol gene type direction distance location
AMCG00009568 NA coding upstream 31384 41775209 ~ 41784537 (+)
AMCG00009564 NA coding upstream 132226 41678552 ~ 41683695 (+)
AMCG00009556 NA coding upstream 227167 41586666 ~ 41588754 (+)
AMCG00009562 NA coding upstream 247089 41560388 ~ 41568832 (+)
AMCG00009554 NA coding upstream 306074 41504994 ~ 41509847 (+)
AMCG00009569 NA coding downstream 15076 41832871 ~ 41844457 (+)
AMCG00009575 NA coding downstream 84038 41901833 ~ 41910118 (+)
AMCG00009577 NA coding downstream 133872 41951667 ~ 41960909 (+)
AMCG00009579 LOC107712727,LOC103384719 coding downstream 161742 41979537 ~ 42029964 (+)
AMCG00009578 NA coding downstream 218223 42036018 ~ 42042211 (+)
G57770 NA non-coding upstream 65777 41749555 ~ 41750144 (+)
G57690 NA non-coding upstream 315703 41499964 ~ 41500218 (+)
G57599 NA non-coding upstream 882711 40932967 ~ 40933210 (+)
G57597 NA non-coding upstream 986244 40829072 ~ 40829677 (+)
G57544 NA non-coding upstream 1472540 40339382 ~ 40343381 (+)
G57792 NA non-coding downstream 21370 41839165 ~ 41839466 (+)
G57843 NA non-coding downstream 267484 42085279 ~ 42088145 (+)
G57940 NA non-coding downstream 584440 42402235 ~ 42402452 (+)
G57945 NA non-coding downstream 597795 42415590 ~ 42418109 (+)
G57946 NA non-coding downstream 600346 42418141 ~ 42418505 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 216797 41596229 ~ 41599124 (+)
G57604 NA other upstream 821262 40990802 ~ 40994659 (+)
AMCG00009516 NA other upstream 1710869 40086474 ~ 40105052 (+)
G57430 NA other upstream 1866721 39948006 ~ 39949200 (+)
AMCG00009480 sst1.1,LOC106579799,LOC105009822,LOC107586749,LOC103023622,LOC107582287 other upstream 2378904 39434900 ~ 39437017 (+)
G57830 NA other downstream 218223 42036018 ~ 42078241 (+)
AMCG00009647 NA other downstream 1619195 43436990 ~ 43444420 (+)
G58324 NA other downstream 2115157 43932952 ~ 43935762 (+)
G58522 NA other downstream 2568702 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 2743982 44561777 ~ 44570531 (+)

Expression


Co-expression Network