G57792


Basic Information

Item Value
gene id G57792
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 41839165 ~ 41839466 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU72251
ATAAAGGTGCAAGTTAAGCGGAGAACTGCTGCGCACCGACAAAGTGTGGGTAGAACAGGCAGTGGTACAGGGTTCGATGAACTTACACCCTTTGAGCAGAGAGTTGCCTCTATCATGGGTGTCACTTTACTCTCTGGAATAGTATCTGATGCTGTGGGAGACTCGGATTTACTACAGGACTGCCACAAAGGTAACTCATTTCCCATTTGTTTGCTTAACTGTGGTACACATAGCTTACCAGCCTGCATTTAATTATCAAATGCATGCAATGTAGCTGACCAAAAGTACACCAGAGATTTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU72251 True 302 lncRNA 0.44 1 41839165 41839466

Neighbor

gene id symbol gene type direction distance location
AMCG00009568 NA coding upstream 54628 41775209 ~ 41784537 (+)
AMCG00009564 NA coding upstream 155470 41678552 ~ 41683695 (+)
AMCG00009556 NA coding upstream 250411 41586666 ~ 41588754 (+)
AMCG00009562 NA coding upstream 270333 41560388 ~ 41568832 (+)
AMCG00009554 NA coding upstream 329318 41504994 ~ 41509847 (+)
AMCG00009575 NA coding downstream 62367 41901833 ~ 41910118 (+)
AMCG00009577 NA coding downstream 112201 41951667 ~ 41960909 (+)
AMCG00009579 LOC107712727,LOC103384719 coding downstream 140071 41979537 ~ 42029964 (+)
AMCG00009578 NA coding downstream 196552 42036018 ~ 42042211 (+)
AMCG00009581 NA coding downstream 236012 42075478 ~ 42078291 (+)
G57775 NA non-coding upstream 21370 41815921 ~ 41817795 (+)
G57770 NA non-coding upstream 89021 41749555 ~ 41750144 (+)
G57690 NA non-coding upstream 338947 41499964 ~ 41500218 (+)
G57599 NA non-coding upstream 905955 40932967 ~ 40933210 (+)
G57597 NA non-coding upstream 1009488 40829072 ~ 40829677 (+)
G57843 NA non-coding downstream 245813 42085279 ~ 42088145 (+)
G57940 NA non-coding downstream 562769 42402235 ~ 42402452 (+)
G57945 NA non-coding downstream 576124 42415590 ~ 42418109 (+)
G57946 NA non-coding downstream 578675 42418141 ~ 42418505 (+)
G57947 NA non-coding downstream 579124 42418590 ~ 42420823 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 240041 41596229 ~ 41599124 (+)
G57604 NA other upstream 844506 40990802 ~ 40994659 (+)
AMCG00009516 NA other upstream 1734113 40086474 ~ 40105052 (+)
G57430 NA other upstream 1889965 39948006 ~ 39949200 (+)
AMCG00009480 sst1.1,LOC106579799,LOC105009822,LOC107586749,LOC103023622,LOC107582287 other upstream 2402148 39434900 ~ 39437017 (+)
G57830 NA other downstream 196552 42036018 ~ 42078241 (+)
AMCG00009647 NA other downstream 1597524 43436990 ~ 43444420 (+)
G58324 NA other downstream 2093486 43932952 ~ 43935762 (+)
G58522 NA other downstream 2547031 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 2722311 44561777 ~ 44570531 (+)

Expression


Co-expression Network