G58319


Basic Information

Item Value
gene id G58319
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 43921474 ~ 43926631 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU72912
GTACCctaaaaacaatttatttttatttaaagtacttttaaaaGCAGACTAAGGAAATTCCAAGATGCATTTGTACAAAAGGTAGTTATTTTGCTGCAGATTCTttttgtcctctctctctctctctctctctcacatgactattttaaaaagacgttatcttgttttaatattatatttatttattttttagatggttttttttttttttttttttacattttcttgtttttttttttaaggtaagaTTCTAGAATTGCAAGAGGGTATTACTGATACAGTACAAGCCAGTAGAATTCCACACAGggttaaatacagtacaagagcaggagaaaaaagaaaagaaaaaaggagggaGGCGCAGGTTGTTTGGTACGTTACAGAGGTGCAGGGAGCGAGATGGCAGTGAGGGCAACACTGACCCCTTTCACTAACCCTGGGCCAACATACGTACAGGGAAAATGACCAGgacttaaaatattttaaaaaataaccatCAACCTACTTCAAACCTTTATATAAATTCGGTAACAATTCAAGACACATTCCCAAAGAAGCACAGTGAAAGTTTCTGTACTATACCATCAGGATGCTTCTGGTTTCTGCACTGTGTTTTGATCGCCTTACTTTCCCTTAACGTGAACTGCATCAAGCAAGACACAGGATCTTTGTATATTTCGGTATTAATGTGGTTTTAAATCCCCCTTCGGAAAATTCTGACATGGTTTATAACCTGTTCGAAATTGCTGGAAAAGACCATGTGCTTAACCTTTATAAATGCAAACCTACTGGTCTGGACAAATCTTGTGGTGTTTATTCCTCTAATCAATTTCTCAGtactttattactttttttttttttttttgtttttct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU72912 True 873 lncRNA 0.34 2 43921474 43926631

Neighbor

gene id symbol gene type direction distance location
AMCG00009660 NA coding upstream 18709 43897866 ~ 43902765 (+)
AMCG00009662 NA coding upstream 31003 43880029 ~ 43890471 (+)
AMCG00009659 uba1 coding upstream 47770 43859081 ~ 43873704 (+)
AMCG00009658 camkvl,LOC101077320,LOC105006803 coding upstream 68945 43834883 ~ 43852529 (+)
AMCG00009655 tbc1d25,LOC104943506 coding upstream 165115 43751483 ~ 43756359 (+)
AMCG00009661 NA coding downstream 13662 43940293 ~ 43951629 (+)
AMCG00009670 NA coding downstream 51961 43978592 ~ 43992050 (+)
AMCG00009668 NA coding downstream 80283 44006914 ~ 44013300 (+)
AMCG00009667 NA coding downstream 87095 44013726 ~ 44022254 (+)
AMCG00009669 NA coding downstream 98913 44025544 ~ 44051535 (+)
G58317 NA non-coding upstream 5714 43909588 ~ 43915760 (+)
G58304 NA non-coding upstream 45751 43873781 ~ 43875723 (+)
G58291 NA non-coding upstream 240521 43678351 ~ 43680953 (+)
G58214 dedd,LOC108411641,LOC107758014,LOC107699191,LOC107603111 non-coding upstream 596895 43318916 ~ 43324579 (+)
G58215 NA non-coding upstream 610412 43309860 ~ 43311062 (+)
G58467 NA non-coding downstream 242854 44169485 ~ 44169789 (+)
G58510 NA non-coding downstream 398520 44325151 ~ 44325573 (+)
G58513 NA non-coding downstream 401640 44328271 ~ 44360062 (+)
G58527 NA non-coding downstream 486641 44413272 ~ 44483247 (+)
G58666 NA non-coding downstream 966214 44892845 ~ 44893078 (+)
AMCG00009647 NA other upstream 477054 43436990 ~ 43444420 (+)
G57830 NA other upstream 1843233 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 2322350 41596229 ~ 41599124 (+)
G57604 NA other upstream 2926815 40990802 ~ 40994659 (+)
AMCG00009516 NA other upstream 3816422 40086474 ~ 40105052 (+)
G58324 NA other downstream 6321 43932952 ~ 43935762 (+)
G58522 NA other downstream 459866 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 635146 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 657931 44584562 ~ 44603609 (+)
G58600 plxna3,LOC107734520,LOC107584894,LOC107674285,LOC107743094 other downstream 706119 44632750 ~ 44651967 (+)

Expression


Co-expression Network