G58467


Basic Information

Item Value
gene id G58467
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44169485 ~ 44169789 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU73083
cctcactttccccatccaaacaatgtggggaagcaataaaaaaggcaaacacaatgttagggtatattgtcaaaagtgtagaattgagaacaagggcagtgatgttcagactgtacaatgcactagttagagctcatctggatactgtggacagttctgggctccacacttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaaagtcctactgagagactgaggacctgaaccttttcaccctggaacagaggagactacgtgagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73083 True 305 lncRNA 0.46 1 44169485 44169789

Neighbor

gene id symbol gene type direction distance location
AMCG00009679 NA coding upstream 8246 44160582 ~ 44161239 (+)
AMCG00009673 NA coding upstream 27331 44128283 ~ 44142154 (+)
AMCG00009674 NA coding upstream 46554 44113411 ~ 44122931 (+)
AMCG00009675 NA coding upstream 56828 44103796 ~ 44112657 (+)
AMCG00009676 NA coding upstream 69910 44091540 ~ 44099575 (+)
AMCG00009681 NA coding downstream 29727 44199516 ~ 44205254 (+)
AMCG00009684 NA coding downstream 51570 44221359 ~ 44222213 (+)
AMCG00009682 si:dkey-96f10.1,LOC106609077,LOC108427753,LOC105900165,LOC108276060,LOC107704228 coding downstream 65762 44235551 ~ 44254047 (+)
AMCG00009680 NA coding downstream 95270 44265059 ~ 44281187 (+)
AMCG00009687 NA coding downstream 133437 44303226 ~ 44314149 (+)
G58319 NA non-coding upstream 242854 43921474 ~ 43926631 (+)
G58317 NA non-coding upstream 253725 43909588 ~ 43915760 (+)
G58304 NA non-coding upstream 293762 43873781 ~ 43875723 (+)
G58291 NA non-coding upstream 488532 43678351 ~ 43680953 (+)
G58214 dedd,LOC108411641,LOC107758014,LOC107699191,LOC107603111 non-coding upstream 844906 43318916 ~ 43324579 (+)
G58510 NA non-coding downstream 155362 44325151 ~ 44325573 (+)
G58513 NA non-coding downstream 158482 44328271 ~ 44360062 (+)
G58527 NA non-coding downstream 243483 44413272 ~ 44483247 (+)
G58666 NA non-coding downstream 723056 44892845 ~ 44893078 (+)
G58660 NA non-coding downstream 748254 44918043 ~ 44921637 (+)
G58324 NA other upstream 233723 43932952 ~ 43935762 (+)
AMCG00009647 NA other upstream 725065 43436990 ~ 43444420 (+)
G57830 NA other upstream 2091244 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 2570361 41596229 ~ 41599124 (+)
G57604 NA other upstream 3174826 40990802 ~ 40994659 (+)
G58522 NA other downstream 216708 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 391988 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 414773 44584562 ~ 44603609 (+)
G58600 plxna3,LOC107734520,LOC107584894,LOC107674285,LOC107743094 other downstream 462961 44632750 ~ 44651967 (+)
AMCG00009706 pim1 other downstream 580387 44750176 ~ 44760058 (+)

Expression


Co-expression Network