G58510


Basic Information

Item Value
gene id G58510
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44325151 ~ 44325573 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU73142
CACATTCatggcatttatttatacagttatataacattttatatttcagtaaCATGACAAAATTCAAAGTTGCATTTATAAGCAATCAAAGTGCAGTTTGAGGTGTACAGTATAGTACTAtcttttaaatagaaaaactaaatgaGTTGTGCAgccttaaataataatacaaggaCACATAGCTGGCAGAGTCTCTGCAGGCGGTATTCTGTACTGAACGGCCCTCTGAGAGGAGCTGTGATCTGGGGCTGATTGAGAGGTCAGTGATCATCCTCCGTTCACTGCGACATCACTCTCCGTCTCTTCTCGGAGGTGGGGggttaaataaacagataaaacacAGAGCCTGTGTCTAGTAACACTGGAGTTATAGAAAATGTTATAAGTGAAGAGGGAATGTGCTGAGGACACTTTAAGACANNN

Function

GO: NA

KEGG:

id description
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU73142 True 423 lncRNA 0.39 1 44325151 44325573

Neighbor

gene id symbol gene type direction distance location
AMCG00009686 taz coding upstream 2354 44314972 ~ 44322797 (+)
AMCG00009687 NA coding upstream 11002 44303226 ~ 44314149 (+)
AMCG00009680 NA coding upstream 43964 44265059 ~ 44281187 (+)
AMCG00009682 si:dkey-96f10.1,LOC106609077,LOC108427753,LOC105900165,LOC108276060,LOC107704228 coding upstream 71104 44235551 ~ 44254047 (+)
AMCG00009684 NA coding upstream 102938 44221359 ~ 44222213 (+)
AMCG00009685 NA coding downstream 38958 44364531 ~ 44372415 (+)
AMCG00009688 NA coding downstream 48128 44373701 ~ 44381036 (+)
AMCG00009689 NA coding downstream 56984 44382557 ~ 44386172 (+)
AMCG00009698 NA coding downstream 114001 44439574 ~ 44442056 (+)
AMCG00009696 flna,LOC108436314,LOC107712729,LOC101154674,LOC107570276 coding downstream 124530 44450103 ~ 44482061 (+)
G58467 NA non-coding upstream 155362 44169485 ~ 44169789 (+)
G58319 NA non-coding upstream 398520 43921474 ~ 43926631 (+)
G58317 NA non-coding upstream 409391 43909588 ~ 43915760 (+)
G58304 NA non-coding upstream 449428 43873781 ~ 43875723 (+)
G58291 NA non-coding upstream 644198 43678351 ~ 43680953 (+)
G58513 NA non-coding downstream 2698 44328271 ~ 44360062 (+)
G58527 NA non-coding downstream 87699 44413272 ~ 44483247 (+)
G58666 NA non-coding downstream 567272 44892845 ~ 44893078 (+)
G58660 NA non-coding downstream 592470 44918043 ~ 44921637 (+)
G58668 NA non-coding downstream 596511 44922084 ~ 44923700 (+)
G58324 NA other upstream 389389 43932952 ~ 43935762 (+)
AMCG00009647 NA other upstream 880731 43436990 ~ 43444420 (+)
G57830 NA other upstream 2246910 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 2726027 41596229 ~ 41599124 (+)
G57604 NA other upstream 3330492 40990802 ~ 40994659 (+)
G58522 NA other downstream 60924 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 236204 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 258989 44584562 ~ 44603609 (+)
G58600 plxna3,LOC107734520,LOC107584894,LOC107674285,LOC107743094 other downstream 307177 44632750 ~ 44651967 (+)
AMCG00009706 pim1 other downstream 424603 44750176 ~ 44760058 (+)

Expression


Co-expression Network