G58666


Basic Information

Item Value
gene id G58666
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44892845 ~ 44893078 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU73337
tgcaggcaggccggccaggagggagttgcagtagtccaggcgggacaggaccagtgactggacgagtagctgagttgagtagtcggtgaggaagggacggatccggcgtatgttgctcaggaagaatctgcaggtgcgcgtcagcgtggtgatgtgctgggagaaggagagcgcaggatcgagggtgactcctagatttttagcggaagaagaaggagagagtgtggtggattc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73337 True 234 lncRNA 0.58 1 44892845 44893078

Neighbor

gene id symbol gene type direction distance location
AMCG00009712 LOC107584919,LOC106904750,LOC106522891 coding upstream 11120 44856527 ~ 44881725 (+)
AMCG00009709 NA coding upstream 111877 44768874 ~ 44780968 (+)
AMCG00009707 LOC107653423,LOC107584890,LOC107743096,LOC107674336,LOC107734533 coding upstream 124617 44764036 ~ 44768228 (+)
AMCG00009708 otud5,LOC106571839 coding upstream 146516 44738679 ~ 44746329 (+)
AMCG00009711 NA coding upstream 180757 44709839 ~ 44712088 (+)
AMCG00009714 usp11 coding downstream 8348 44901426 ~ 44916843 (+)
AMCG00009715 NA coding downstream 34789 44927867 ~ 44933814 (+)
AMCG00009716 elk1,LOC103384389,LOC102208123,LOC100703163 coding downstream 57595 44950673 ~ 44962284 (+)
AMCG00009719 NA coding downstream 73801 44966879 ~ 44969079 (+)
AMCG00009722 NA coding downstream 82582 44975660 ~ 44984837 (+)
G58527 NA non-coding upstream 409598 44413272 ~ 44483247 (+)
G58513 NA non-coding upstream 532783 44328271 ~ 44360062 (+)
G58510 NA non-coding upstream 567272 44325151 ~ 44325573 (+)
G58467 NA non-coding upstream 723056 44169485 ~ 44169789 (+)
G58319 NA non-coding upstream 966214 43921474 ~ 43926631 (+)
G58660 NA non-coding downstream 24965 44918043 ~ 44921637 (+)
G58668 NA non-coding downstream 29006 44922084 ~ 44923700 (+)
G58776 NA non-coding downstream 250097 45143175 ~ 45143472 (+)
G58792 NA non-coding downstream 301445 45194523 ~ 45198264 (+)
G58825 NA non-coding downstream 373861 45266939 ~ 45275033 (+)
AMCG00009706 pim1 other upstream 132787 44750176 ~ 44760058 (+)
G58600 plxna3,LOC107734520,LOC107584894,LOC107674285,LOC107743094 other upstream 240878 44632750 ~ 44651967 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other upstream 289236 44584562 ~ 44603609 (+)
AMCG00009694 LOC103385381 other upstream 322314 44561777 ~ 44570531 (+)
G58522 NA other upstream 485277 44386497 ~ 44407568 (+)
G58747 NA other downstream 162987 45056065 ~ 45057874 (+)
AMCG00009761 NA other downstream 614689 45507767 ~ 45511037 (+)
AMCG00009759 NA other downstream 666899 45559977 ~ 45572255 (+)
AMCG00009760 NA other downstream 680192 45573270 ~ 45575964 (+)
AMCG00009758 abcd1,LOC107701814,LOC107743108,LOC108440542,LOC107674359,LOC107552221,LOC107727428 other downstream 683461 45576539 ~ 45584727 (+)

Expression


Co-expression Network