G58747


Basic Information

Item Value
gene id G58747
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45056065 ~ 45057874 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU73437
AAAAAAATgctaacaaaatcaaaaaacaattcTGTACAACCATATTTATAATAAGAggaatatttaatgtatatctatatatatctatatctatatatatatatatatatatatatatatacatataaatatatacacatccCTTCTTAACGCAGTCTCCGGTGTGTCAGGAATGACTGTCCAAAGCACAGCACGGCCCGACACCATTCACACCTCGATCCCGAGAAGCAAACGCTGGGAAGGAAAAAACAGTCACATGATTCCTGTCCATCCTCTTCTCCCTTACGATTCCATAGACTCCACTGCATTGGTTCAGGAGCGGAAACAATGGCGATGAGGCAAGAGGTGTGCGCCGCAGGGCCACCGTGCCTCGTCCGGCGACTCTCAATCACAACCGGTTGACAGCAGCTGCCCGAGAGTCTCCTGGATGAACAGACAGTCGTGTCTATTTACTAACACCATGGATCTGCCTCCGCTCCGCTGCGCTACGTCCGCAAGTAGAGCCTCGTCTCTGTCAGTAAATACACAGAACTGGATAACTAGTCTTCAGCCAGTTGGTTATATGTAGGTGCGACACAGCGTTGAGAGAGCTGACCCTTCCTGGCACCGACGGACGAACGAGTAATAAATGAGCCCCACGACACCCACTGATCAAAGTTCCAAAAAGCCCCCCAACACCGAGCCCCTCTCCACTCATTAATGTTGTTCACCGATTCGGAGCTGCCGACACGCCCCCcccaataaataaaccaaataaactaGAATGAGACACTAAATCAGTGACCGATGGTGTCGCTGTGATGAAGTGCCGAATCAGTGCGAAGGCTGTGGTGGAGATCGGTCACGGGCACCACCGCAGCCAGGTCCAAAAACTCTCATCCACACAagcgccccccacccccagtacCCCTGCCACGGCACGGAGCTGCTCCCACTGGCCCCCACTGGCCCCCACCAGCCCCGGGGCGGTACTTAAGAGTTCATGCAGACGGAAGGAGAAAATCGAAAGCGAGGCATTCTCAGCtctgctgtgttttctgtgccGGACAAACACCGATCATTCACTTCACATGCAGGCGGTTAGCAGACCGAAGGGCATCGCTGCGGACCCCTGATGTGCCCCGACAGGCAGTCACCAGGCTCCAGGGGGCCACACACCATAGCTATGGGTAAAAAAGAACCTGTCACTGCGGTACTGAGAGGTGGACGGTCAGGTTAAGAGACGATGCTCGCTGTACTGCTCAGTAATGgagacaaacaacaacaaccgaCCACAGGCCCGTTCAACAAGAAAGCTCTGCCCCCCCCGGGCCGCAGAGAGGCGGCCGAGTCCGCAACCCGGAGGTgaggagggacagagagagggagggggctgagcgggagagagaaaaagaaaaaggagagaaagcAGAGGGAGTATAGCTCAGTACAGCACAAGCCctttcatatataaatgtatattaaaaaaactgtaaaaaaaatccaTTGGCTTCATTTCTGGTGCACTGAAGGAAGACCCCCACAGGGAGGGTGGTCTCTGCGGCGCCGATACGGCCGAGCGGAGTCGAGCGGAGGGGCCCAGGGGCTCAGGGGCTCGGGGGTCCCTCTCTCACAcggccccccgcccccccgccagTGGCCTGGCCTGCAGGACGGTCAGCAGCCTCTCCCGGCTCGGAGTGATCCAGCGCCCGGGCCTGGGGGCGTCTCCGGGCCGGGGGTCCGCGCTCCAGTGCTCCAGCACCTCGTCCGCCTCGGtgtcatcctcctcctcccctggGCTGCTGCCCTCGCCCTCCCCCTCTCGGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73437 True 1810 TUCP 0.55 1 45056065 45057874

Neighbor

gene id symbol gene type direction distance location
AMCG00009721 NA coding upstream 24285 45005169 ~ 45031780 (+)
AMCG00009726 NA coding upstream 52493 45001138 ~ 45003572 (+)
AMCG00009720 NA coding upstream 58057 44989273 ~ 44998008 (+)
AMCG00009722 NA coding upstream 71228 44975660 ~ 44984837 (+)
AMCG00009719 NA coding upstream 86986 44966879 ~ 44969079 (+)
AMCG00009730 magix,LOC101063258,LOC108228699 coding downstream 31329 45089203 ~ 45093238 (+)
AMCG00009728 NA coding downstream 47662 45105536 ~ 45111832 (+)
AMCG00009727 NA coding downstream 57789 45115663 ~ 45119186 (+)
AMCG00009731 NA coding downstream 77550 45135424 ~ 45136858 (+)
AMCG00009729 LOC108228711,LOC105898895,LOC107731232,LOC103365588,LOC103384398,LOC101079199 coding downstream 81666 45139540 ~ 45169283 (+)
G58668 NA non-coding upstream 132365 44922084 ~ 44923700 (+)
G58660 NA non-coding upstream 134428 44918043 ~ 44921637 (+)
G58666 NA non-coding upstream 162987 44892845 ~ 44893078 (+)
G58527 NA non-coding upstream 572818 44413272 ~ 44483247 (+)
G58513 NA non-coding upstream 696003 44328271 ~ 44360062 (+)
G58776 NA non-coding downstream 85301 45143175 ~ 45143472 (+)
G58792 NA non-coding downstream 136649 45194523 ~ 45198264 (+)
G58825 NA non-coding downstream 209065 45266939 ~ 45275033 (+)
G58830 NA non-coding downstream 218614 45276488 ~ 45277596 (+)
G58822 NA non-coding downstream 271910 45329784 ~ 45332856 (+)
AMCG00009706 pim1 other upstream 296007 44750176 ~ 44760058 (+)
G58600 plxna3,LOC107734520,LOC107584894,LOC107674285,LOC107743094 other upstream 404098 44632750 ~ 44651967 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other upstream 452456 44584562 ~ 44603609 (+)
AMCG00009694 LOC103385381 other upstream 485534 44561777 ~ 44570531 (+)
G58522 NA other upstream 648497 44386497 ~ 44407568 (+)
AMCG00009761 NA other downstream 449893 45507767 ~ 45511037 (+)
AMCG00009759 NA other downstream 502103 45559977 ~ 45572255 (+)
AMCG00009760 NA other downstream 515396 45573270 ~ 45575964 (+)
AMCG00009758 abcd1,LOC107701814,LOC107743108,LOC108440542,LOC107674359,LOC107552221,LOC107727428 other downstream 518665 45576539 ~ 45584727 (+)
G59084 NA other downstream 696712 45754586 ~ 45755115 (+)

Expression


Co-expression Network