AMCG00011336 (LOC107715168,LOC103027224,LOC108430945,LOC108274535,LOC103354395)


Basic Information

Item Value
gene id AMCG00011336
gene name LOC107715168,LOC103027224,LOC108430945,LOC108274535,LOC103354395
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 19296084 ~ 19307708 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011336
CATGTGTTTATAAGTGTGATGCCTCTGAGCAGCCCGCAGCTGCCTCCCTTGTGATGCATTATCCAAATCAGCGACAGGAAGCAGCAGACTGTCTTCTAAAGCCTGCTTGGCTCTTCTGCCCTGatttccagaccagcaagtgtCAATGATGTATGGACTGCTTTGTGAGAGTCTGCACGACTTCATTAAAGAATCCTACGGGGATGATGTGTGGAAGCTGGTCCGTGAGAGGGCCGATGTCAGGCTGCATTCCTTCGTCACCCATCAGGTTTACAGTGAGAGTGTCATTCCCCGCATCGCCAAAGCTGCCAGCGGAGTAACAGGAACGCCATACAATGAGCTGATGAACTCCTGGGGTGTCTACTTCCTGGGTTTTGTAGGGAAGTACGGCTATGACAGAATTTTAAAGGTGTTGGGTCGACATGTCAGAGACTTCGTCAACGGGCTGGACAACCTTCACGAGTACCTCCGCTTCAGCTACCCCAAAGTCCAGCCGCCCACGTTCTTCTGCCAGGAAGAGTCGGCCACTGGAGTCACCCTGCACTACAGGAGTAAGCGCAAGGGTTACCTGCACTACGCCATGGGTCAGCTGAGGCAGATGGGAAAGCAGTTCTACGACACGGACATCCACGTGGAGGTTCTGTCGGAGCAGCTTGTGGGAGACTATTCACACGTCACCATgagGTTGAACTTCGACAACTCTGCCTATCGTTACATCCAGAAAGAGGACGAGGAAGAACAAGAGATTCTGCCAATCACCAGCGACTTCTTCTTCGAGGTTTTCCCTTTTAACATTGTCTTTCGACAGGACATGGTTGTCCACAATGTGGGCTCAGGGCTGGCCACAGTTTTTCCAGATTTGGATGGAAAGAAAATCAACGATGCATTCCTGCTTGCCCGTCCGCTGGTGGAGTTCACTTGGAATATGATTATATCACACCCAAACAACTTGTTTGAGATCATGTCAAAGGAGCCGGTGAAAAGAGAGAGGAACCTCCACAATCGAGTGCAGAATGGGAACAGCTCTAATGCCATGGAGAGCTGGGGAGACGGGAGCCGTTGTCTGAAGCTCAAAGGGCAAATGAGATACATGCCAGAGTGGGAGTCCATTATCTTTCTGGGCACACCTGTGATGGAAAGCTTGAGCGCCATGTTTAAGACTGGACTGTATATCAATGACCTCAGCATGCATGACTCGAGTCGAGATCTAGTGCTGGCGGGAACACAACAGTCTGAGGAGCTGAAGAGAGCCCTTATACAGGAACAGAAGAAGTCTAGTAAACTGGAGGAGAGTATGAAGATGCTGGACTATGAGATGAAGAAGACCGATGACCTGCTGTACAGAATGATCCCCAAGCCAGTGGCCAAGCGGCTGCGCAAAGGGGAACCTGCGGTCAACACCTGTGAGGTGTTCCCAGATGTGACAATTCTCTTCAGCGACGTGGTGGGCTTCACCCGAATCTGCAGCCACATCACTCCCATGCAGGTGGTCTCCATGCTGAATACTATGTACACTCTGTTTGACACCCTCAGCGAGAAGCACAGAGTCTTCAAGGTGGAAACTATAGGAGATGCATACATGGTGGTGGCTGGTGCTCCTGAGAAGACCAAGTATCATGCCCACAACATCTGTGACATGGCCCTGGATATGGTGCGCTCCATTGACCACCTGAAGGATCCCTCCACTGGGAACAACATCCAGATCAGAGTGGGAATCCATTCAGGAATGGTGGTGGCTGGAGTGGTGGGACACAAAATGCCACGCTACGGTCTTTATGGAGACACAGTGCACACAGCCTCTGCCATGGAGAGCAATGGAAAGGAAATGCATATCCAGTTAAGCAGTGCTACCTATGAACACCTCAAAGGAAGCCATTTTATCTTTGAAAGGAGAGGCACAATCACTATCAAGGGGAATGTAGAAATTGAAACCTATTGGCTGAAGGGGAAGAGAGACAAAGACGGCAATGCCCAGGCAGCCTGCCCCCAGTTTGAGACTCAGACTATCAGCAAAGCCACTATCTCCCCGCCAGACACCCCCATCAATGAGGACGAATTGGTCTTTCCCGCAGTGGCAGGAGACGATGAAGATGATATCAAATCCCTGCGATCTCATCGGATTAAAATGGAGGTGACTGGGAACTCACTGGAGGAGTCTCTGGAGGAGTGTGGTGTGGAGGAAACGTCAATGAATAAGCCTCACTACAAGGACTCGCTATTGGACACCAGACTACAAGCTGCACACAATGAGCTGGACTCCCCAGAGTTCAACGGGAAAAACGCCATCCTCGAGTCCTCTGACAGCTCAGAGTCCTGCCGCTCACAGAAGAGTGTCCTGTGTTCGGTGTGTTGATCTGGGAAACTGCAGAAAGACACCTTACAGCTCTAGGGCATGAAAGGTTAGTTTTGTATTGTACAAGTGTTGATTAAATTTCATATGTTATTCTAATGAGTGACAGAAATCCTGTAGtggaataataatttaattgcatataATATCAACACATGTCTCTCACAAGGAgattaaaagtaatatttttgtatttatataccaATGTTCAGAACAAAGTTGTCAGACTTTGAAATATACCTGTTATTAACTTTTTGGTCTTGGAATAACTGGGTTGATGCTGATTTTTGTATGATGCGCTTTAATATTTGAGatataaatacaatgtgtaCTAGATAATGTACagaaaattatacataaaaaagtCAAGGATATGACTAAACAAAATGAACAGATcaacaatacatcacatttgtAAGTGTTGTGTAGactgattgttttattgaaacaCCAATGCAATGCCCATAGCCCTAATAgtaacctttaaaaatatacatttgaaaaacctCAGGTTCTGTGtgtgcattattttcttttttcttttgatttctt

Function

NR:

description
PREDICTED: soluble guanylate cyclase 88E-like

GO: NA

KEGG:

id description
K01769 E4.6.1.2; guanylate cyclase, other

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011336 True 2902 mRNA 0.47 18 19296084 19307708

Neighbor

gene id symbol gene type direction distance location
AMCG00011332 NA coding downstream 34132 19247624 ~ 19261952 (-)
AMCG00011333 NA coding downstream 78245 19209822 ~ 19217839 (-)
AMCG00011334 NA coding downstream 88055 19200496 ~ 19208029 (-)
AMCG00011330 NA coding downstream 174105 19116497 ~ 19121979 (-)
AMCG00011317 NA coding downstream 1023880 18271412 ~ 18272204 (-)
AMCG00011335 rbm22,LOC107685490 coding upstream 6119 19313827 ~ 19322039 (-)
AMCG00011345 NA coding upstream 130515 19438223 ~ 19444151 (-)
AMCG00011349 NA coding upstream 191652 19499360 ~ 19513320 (-)
AMCG00011348 NA coding upstream 209723 19517431 ~ 19539640 (-)
AMCG00011350 LOC105888595 coding upstream 242519 19550227 ~ 19570328 (-)
G105918 NA non-coding downstream 51601 19233722 ~ 19244483 (-)
G105859 LOC105030512,LOC106609167,LOC106569888 non-coding downstream 679000 18616849 ~ 18617084 (-)
G105823 NA non-coding downstream 1048314 18175668 ~ 18247770 (-)
G105840 NA non-coding downstream 1051939 18240676 ~ 18244145 (-)
G105795 NA non-coding downstream 1262939 18032755 ~ 18033145 (-)
G105967 ndst1,LOC106611870,LOC107094997 non-coding upstream 68805 19376513 ~ 19376908 (-)
G105968 NA non-coding upstream 89085 19396793 ~ 19480084 (-)
G106023 NA non-coding upstream 280467 19588175 ~ 19588972 (-)
G106163 NA non-coding upstream 633321 19941029 ~ 20014274 (-)
G106183 NA non-coding upstream 763774 20071482 ~ 20115868 (-)
G105890 NA other downstream 190815 19102293 ~ 19105269 (-)
AMCG00011316 LOC107664359,LOC107560145,LOC108427843,LOC107752026,LOC105007072,LOC103354679 other downstream 1104889 18180646 ~ 18191195 (-)
G105793 NA other downstream 1295639 17999668 ~ 18000445 (-)
G105770 NA other downstream 1544582 17751253 ~ 17751502 (-)
AMCG00011313 NA other downstream 1544985 17717626 ~ 17751099 (-)
G105970 rps14,RPS14,rs14,LOC100194652,LOC107685488,LOC107588790 other upstream 102660 19410368 ~ 19413015 (-)
AMCG00011356 ndufa2,ndua2,LOC106602938,LOC107661794,LOC107569768 other upstream 557906 19865614 ~ 19867902 (-)
AMCG00011391 smad5,LOC107664766,LOC107563595,LOC105912044 other upstream 3234941 22542649 ~ 22554137 (-)
AMCG00011399 NA other upstream 3435722 22743430 ~ 22753616 (-)
AMCG00011409 NA other upstream 3745605 23053313 ~ 23060966 (-)

Expression


Co-expression Network