G162054



Basic Information


Item Value
gene id G162054
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id PESF01000031.1
NCBI id PESF01000031.1
chromosome length 187035
location 170388 ~ 170637 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU204055
CCTAATGTGACATTGCTAGTTGAGGatattgtgaaaacagtggATGCCCTCCCCAACATGCTcaagagaatgctgtataaaGATCCACGGCCTGGTGTACCTGCTTTTACAGCTGTTCAAAAAGTTCTCCAGAGTTCTTTTGGAAACACCATCCCTATCATGACCAAGTCCAATTTCTACACTGTGCTAGACAAAATAGCAATGATCTGTGTCGCTGCCCTTGCAAATAAACAGGTTGAGGGTGTTGCTT

Function


GO:

id name namespace
GO:0072329 monocarboxylic acid catabolic process biological_process
GO:0017001 antibiotic catabolic process biological_process
GO:0019541 propionate metabolic process biological_process
GO:0019543 propionate catabolic process biological_process
GO:0009062 fatty acid catabolic process biological_process
GO:0019626 short-chain fatty acid catabolic process biological_process
GO:0046459 short-chain fatty acid metabolic process biological_process

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU204055 True 250 lncRNA 0.44 1 170388 170637

Neighbor


gene id symbol gene type direction distance location
AMCG00014056 NA coding upstream 10447 27913 ~ 159941 (+)
G162042 NA non-coding upstream 52529 117451 ~ 117859 (+)
G162041 NA non-coding upstream 56511 113671 ~ 113877 (+)
G162036 NA non-coding upstream 73094 97049 ~ 97294 (+)
G162034 NA non-coding upstream 77300 92675 ~ 93088 (+)
G162049 NA other upstream 9761 159786 ~ 160627 (+)

Expression



Co-expression Network