AMCG00014061


Basic Information

Item Value
gene id AMCG00014061
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 136864 ~ 247002 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014061
ATGTCTGATGATATGAACATAGCTGACTTGGTTCAGACTGAAGACGTTGTCCAGCCCAGACTCTTCACAGCAGCGCAGCTTGGAGACTCTGTGACTCTGGAGTGCTTCATATCGACTGAGAGAATTAACTACCTGTCTTGGTTCAAGCAAACCGTTGGACAGAGACCTCGAGGAATTGTAACTTCTTATAGTTATCTAGAAGGCTTCACATTTTACAACGAGTTCCGCAATAACCCCCGCTTCACGTCAGACGCAGCCGCGTATTACTGTGTAACGATTTACCAAAACAGTGTGCAGTTTGGAAATGGAACCGTTCTGATGCTGAAGGGCTCTCAATCCAACAGAACCATTGTGCAGCAACCAGCGTCTTTCTCCGTCCAGCCAGGAGACAGTGTGACTCTGCAGTGCACAATACACACTGAGACCTGTGCAGGAGAGCACAGTGTTCATTGGTTCAGGCATGGCTCAGGAGAAGCCCTTCCAGGACTCATTTACACCCATGGGAACAGGAAGTCTAGTTTGCAGCTGAGCCCTGCTGTCCTGGTGCTGCTGGTGtccaactgtgtgtgtgtgctggtgatCGCTGTGCTCGTGTGCACCGGGAGGGGGCAGTGTGGGCGCGGTACAGGTCAAGCCAGCCTCAACCCCCTTGTCCTGGCCTTGGGGGCGTCAAacgctgtgtgtgtgctggtgatCGCTGTCCTCGTCTGCACCAGGAACGCGCGCTGCGCAGgAGATCCACAGTCCTCTCCTGATGCAGTAAAGACCCACACCAGTCACCAGGGCTGCAGTGTTGGTCACTGTGAGGAGGACGTCCAGAAGCTGCTTCTGGAAACACAGCAGAGAAAGGTGATGCAGAGACCCAGGGGATTGTGGGATAGAGAGGCTACACGTAAATAA
>TU84399
ATCCACAGTCCTCTCCTGATGCAGTAAAGACCCACACCAGTCACCAGaatCAGGACACAGAGCTGGTGAATTACGCTGCCCTGAAGTTCACTGCCAACAGAGCAGTGCATCCTGGGAGAAGGAGGCGAGAGACGGACCCACATGTGCTGTATGCTGATGTCAGAGCTCAGCAATGGGACTGAGCGCCCTAGGGGGTTAAACCCTGCAGTGACTGTGAGACAGGCCGGCCAGACCAGCTCCAGCCTCAGGACGCAAATGGGGTCAAATACCTATAAGCATAT

Function

GO: NA

KEGG:

id description
ko04064 NF-kappa B signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014061 True 900 mRNA 0.53 8 136864 162410
TU84399 False 281 lncRNA 0.55 2 147188 247002

Neighbor

gene id symbol gene type direction distance location
AMCG00014062 NA coding upstream 643 124143 ~ 136221 (+)
AMCG00014065 NA coding upstream 34932 97427 ~ 101932 (+)
AMCG00014068 NA coding downstream 5273 252275 ~ 257660 (+)
AMCG00014069 NA coding downstream 32128 279130 ~ 349175 (+)
AMCG00014071 NA coding downstream 132208 379210 ~ 386103 (+)
AMCG00014077 NA coding downstream 940557 1187559 ~ 1188536 (+)
AMCG00014083 NA coding downstream 987690 1234692 ~ 1244467 (+)
G67684 NA non-coding downstream 554262 801264 ~ 801464 (+)
G67685 NA non-coding downstream 557535 804537 ~ 804746 (+)
G67690 NA non-coding downstream 734837 981839 ~ 1022813 (+)
G67698 NA non-coding downstream 1003097 1250099 ~ 1250314 (+)
G67699 NA non-coding downstream 1028989 1275991 ~ 1276216 (+)
G67577 NA other upstream 29742 58449 ~ 107122 (+)
AMCG00014099 NA other downstream 1232917 1479919 ~ 1497604 (+)
AMCG00014104 cyyr1,LOC107751099 other downstream 1588430 1835432 ~ 1838125 (+)
G67801 NA other downstream 1632089 1879091 ~ 1881041 (+)
AMCG00014111 NA other downstream 1653218 1900220 ~ 1902687 (+)
G67896 NA other downstream 1879870 2126872 ~ 2130145 (+)

Expression


Co-expression Network