AMCG00014095


Basic Information

Item Value
gene id AMCG00014095
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 1545327 ~ 1564574 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014095
ATGGACCACAGCTCTGTCCAGCCGATAATCCGCGCAAAAGCACGAGCGGCGGCGCTGTTTAAAGGCTCCCGTCGTGCACTGCGCCACAGACTACACTACCCACAACCCCCTGCAGCAGCACAGAACACGTGGAGAAACTTTGCAACTGCTGAAGAGAAACCCGCACCTGAGACCCGCACCTGGGACCCGCAGCGCAGCTCCTCTCCGCTCTCCGACGCTGCAGACCGCGCCGCCACTCTCCACGGTGCCATGGCAGAGCGGGTGCTGGTGATTGGCAGCGGGGGCAGGGAGCACGCCCTGGCCTGGAAGCTGGCCCAGTCCCCCCTGGTCCAGCAGGTGCCCCTGGCTGCAGGCATGGTGGATGACCTCATGGCGGCGGGGGTGCGCAGTTTCGGGCCGTCGGCCAAGGCGGCTCAGCTGGAGGCCAGCAAGAGCTTCTCCAAGAGCTTCATGGATCGCCACGGCATCCCCACGGCGCGCTGGTGCAGCTTCACCGACGCCCAGGAGGCCTGCAGCTACATACAGGGGGCGGATTTCCCGGCGCTGGTGGTGAAGGCAAGCGGGCTGGCGGCGGGGAAGGGTGTGATCGTGGCAGCTGACCGGGAGCAGGCCTGCCAGGCGGTCAGGGATATCCTGCAGGACAAGGCATTCGGCTCGGCGGGGGAAACCGTGGTGgtggaggagctgctggagggagaggaggtgTCGtgtctgtgtttcagCGATGGCTCCACAGTGGCCCCAATGCCCCCTGCCCAGGACCATAAGCGGCTGCTGGATGGAGACCAGGGGCCCAACACGGGTGGCATGGGAGCATACTGCCCCACCCCTCAGgTGTcggaggagctgctgctgcaaGTCCGAGAGACTGTCCTGCAGAAGACCGTGGACGGGATGAGGCAGGAGGGGGCCCCGTATGTGGGAGTGCTGTATGCCGGGCTGATGTTGACCAAGGACGGGCCCAAGGTGCTGGAGTTTAACTGTCGCTTCGGAGACCCCGAGTGCCAGGTCCTGCTGCCCCTCCTCAAGAGCGACCTGTATGAAGTTCTTCAGGACACACTGCAGGGCAAACTGGCCACTAACCCCCCCGCCTGGCTCGACAAGAGTGCTGCAGTCACTGTGGTCGTGGCCAGTGAGGGCTATCCCGGGGAGTACAAGAAAGGTGTTGAGATCACAGGGCTGGCCCAGGCCAAGGAGCTGGACCTGCAGGTGTTCCACGCGGGGACGGCGCTGCGCGAGGGCCGGGTGGTGACCTGCGGCGGGCGCGTGCTTACCGTGACGGCTGTGCGGCCGGACCTGGAGAGCGCACTGCAGTGTGTCAACCGTGGCCTGGACGCCGTGAGCTTCCCTGGCGCCGTGTACCGCAGAGACATCGGCCACAGAGCCATCGCCTTCCTGCGCCAGCCCAGGGGTCTGACCTACAAGGACAGTGGAGTGGACATCGCGGCGGGCAATGTGCTGGTCGATCTCATCAAACCGCTGGCCAAAGCCACGGCCCGCAAAGGGTGCAATGCCGAGCTGGGGGGCTTCGCTGGGCTGTTCGACCTGAAGGCTGCAGGATTCAGCGACCCCATCCTGGTGTCTGGGACTGATGGAGTGGGCACCAAACTCAAGATCGCTCAGGCATGTGACCGGCACAGCTCACTGGGTCAAGACCTGGTGGCCATGTGTGTGAACGACGTGCTGGCGCAGGGGGCTGAGCCGCTCTTCTTCCTGGACTACTTCTCCTGTGGAAAGCTGGATGTGGGCGTGGCCTCCTCTGTGATTGGCGGGATCGCGGAGGCGTGTCGCATGGCTGGGTGTGCCTTGCTGGGGGGCGAGACGGCGGAGATGCCGGGGGTGTATGGCCCTGGCGAGTACGACCTGGCGGGGTTCTGCGTGGGCGCGGTGGAGCGAGGCCAGATGCTGCCTCGGCTCCAGGACATCGGAGAGGGTGACCTGCTCGTGGGCCTGGCCTCCTCCGGCGTGCACAGCAATGGCTTCAGCCTGGTGCGCCGGGTGCTGGATCTCTGCGGCCTGCAGTACGACTCCCCCGCCCCCTTCGGGAGCCTCGGGCAGACTGTGGGCGAGGTGCTGCTCACTCCCACCAAGATCTACAGCCAGCTGCTGCAGCCCGTCCTGCGCGGCGGCGCGGTGAAGGCCTATGCACACATCACTGGGGGCGGGCTGCTGGAGAACATCCCACGCGTGCTGCCCAAGGGGCTGGCCGTGGACCTGGACGCCTTGCTCTGGCGCATCCCGGCCGTGTTCTCGTGGCTCCAACGGGAGGGTGCTCTGTCGGAGGAGGAGATGGGCCGCACCTTCAACTGCGGGCTGGGCGCCGTGCTGGTGGTGGGGCGGCAGGAGGCCGAGCGGGTGCTGAAGGAGGTGCAGGGCCAGGAGGAGGCGTGGATCGTGGGCTCCCTCACGCGCAGGCAGCCAGGGGTGGAGCAGGTGGTGGTCAGGAATCTCCAGCGCTCCCTGCAGACGGGGCTGACCACCCCCCCGGACAGCAGCCTCGGGACGAACCTGCAGGCTCTGATCGAGCAGGCCAAGTCTCCCTCCAGCGCGGCCGAGATCGTCCTGGTCGTGTCCAACAGGCCCGGTGTGCTGGGGCTGAAGAGAGCAGCGCTGGCTGGCATCCAGACCAGGGTTGTGGACCACAAGCTGTACGGGAGCCGGGCCGAGTTCGACGGCACCGTCGACCGTGTGCTGGAGGAGTTCGGTGTGGAGGTCGTCTGCCTCGCCGGCTTCATGAGAATCCTCAGCGGTGCCCTGGTCAGGAAGTGGAACGGGAAGATGCTGAACGTACACCCCTCCCTTCTGCCCTCCTTCAAGGGGGTCCACGCCCACAGGCAGGCGCTGCAGGCTGGAGTGCGTATCACCGGCTGCACCGTGCACTTCGTGGCGGAGGAGGTGGATGCCGGAGCCATCATCGTGCAGGAGGCGGTGCCCGTGCTGGAGAGTGACACGGAGGAGAGCCTATCGGAGCGCGTGAAGGAGGCAGAGCACCGGGCCTTCCCTGCCGCCATGGAGCTGGTGGCCAGCGGGGCCGTGTGCCTCGGGGACGACAACCGCATCGTGTGGAGCCACACCCAGCTGCACTAACCCCTCCCCCGCCACCCGACCCCACAGCCCTGTCCCCGAACAACCGCCGCAGCACCCGGCTGTGCCAGCTCCCCCTTCCTGATTAAAATCCTTCTCTCTTAGCGTGGCATCCTTCCCCCTGGAGCAGAGGCACAGAGGTGGCCAGGACCGGTAGGAGCTCCAGGGAATAGACTTCCCGTATTAGTCTCAACCCTTTAATGTTTTGGAAAGTAGAGCCAGTCTAGCAGTGTCTTACATCACACAGGTGGGAATCCAGGaagagagatgggagagagaggtgggtTTCTGTAGCTGCAGCTGTGCTTCAGGGACAGGACTGTTCATGTGCTGTCCAATGAATTACACGTACAGAATTCACACGTGTGGGCAGGGCAGGAGAAGCCTTGTATTGATGATTGTCACATGCATGGTTGTGGTATTGTGGGAATGTGTccacgagagagagagcgcctGTAAAGCCTGCTACTAAAGGAGACTGTTGTTCTTTACTGCTCAATGGTGAAATATCTCTTGCTGCCCTGTGTCTTGATTTGTGTCGTTTACATTAAACTCACTGGG

Function

GO:

id name namespace
GO:0009113 purine nucleobase biosynthetic process biological_process
GO:0006189 'de novo' IMP biosynthetic process biological_process
GO:0032259 methylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0008168 methyltransferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0004637 phosphoribosylamine-glycine ligase activity molecular_function
GO:0004641 phosphoribosylformylglycinamidine cyclo-ligase activity molecular_function
GO:0004644 phosphoribosylglycinamide formyltransferase activity molecular_function

KEGG:

id description
K11787 GART; phosphoribosylamine--glycine ligase / phosphoribosylglycinamide formyltransferase / phosphoribosylformylglycinamidine cyclo-ligase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014095 True 3645 mRNA 0.64 24 1545327 1564574

Neighbor

gene id symbol gene type direction distance location
AMCG00014096 NA coding upstream 102 1541410 ~ 1545225 (+)
AMCG00014089 NA coding upstream 111719 1412350 ~ 1433608 (+)
AMCG00014094 NA coding upstream 153389 1390961 ~ 1391938 (+)
AMCG00014093 NA coding upstream 162847 1381500 ~ 1382480 (+)
AMCG00014092 NA coding upstream 163837 1371192 ~ 1381490 (+)
AMCG00014100 NA coding downstream 235108 1799682 ~ 1813298 (+)
AMCG00014101 NA coding downstream 261281 1825855 ~ 1833360 (+)
AMCG00014102 app coding downstream 294104 1858678 ~ 1869442 (+)
AMCG00014103 NA coding downstream 308175 1872749 ~ 1878960 (+)
AMCG00014106 NA coding downstream 356765 1921339 ~ 1925062 (+)
G67699 NA non-coding upstream 269111 1275991 ~ 1276216 (+)
G67698 NA non-coding upstream 295013 1250099 ~ 1250314 (+)
G67690 NA non-coding upstream 522514 981839 ~ 1022813 (+)
G67685 NA non-coding upstream 740581 804537 ~ 804746 (+)
G67684 NA non-coding upstream 743863 801264 ~ 801464 (+)
G67792 NA non-coding downstream 255999 1820573 ~ 1821758 (+)
G67789 NA non-coding downstream 275591 1840165 ~ 1842445 (+)
G67882 NA non-coding downstream 512729 2077303 ~ 2077602 (+)
G67899 NA non-coding downstream 583875 2148449 ~ 2148654 (+)
G67907 NA non-coding downstream 768917 2333491 ~ 2333944 (+)
AMCG00014099 NA other upstream 47723 1479919 ~ 1497604 (+)
AMCG00014061 NA other upstream 1298325 136864 ~ 247002 (+)
G67577 NA other upstream 1438205 58449 ~ 107122 (+)
AMCG00014104 cyyr1,LOC107751099 other downstream 270858 1835432 ~ 1838125 (+)
G67801 NA other downstream 314517 1879091 ~ 1881041 (+)
AMCG00014111 NA other downstream 335646 1900220 ~ 1902687 (+)
G67896 NA other downstream 562298 2126872 ~ 2130145 (+)
AMCG00014146 NA other downstream 1142266 2706840 ~ 2710329 (+)

Expression


Co-expression Network