AMCG00014099


Basic Information

Item Value
gene id AMCG00014099
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 1479919 ~ 1497604 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014099
ATGAGCGACCCCAACACCTCCCTGCCCTCAGCCTCCTATTTCATCATTGTGGGAGTGCCAGGCCTGCAGGAGCACTACACCACActcttcctcatcctcctcctcttcttcctgaCCACCATCCTGGGGAACCTGCTGATCCTGGTGCTGCTGTCCCTGGACCCCCGGCTCCACACACCCATGTACTTCTTCCTGTGGAACCTGGCTCTCCTGGATATGCTGCTGACTGTTATTGTCACACCCAagctgctggctgtgctgctgggctACAACAGGATCTCCTTCACTGGCTGTTTCCTGCAGATgtactttttcatttcagtcagTGCCACTGAAGTTTTCCTCGTGGCGGCCATGGCTTACGACCGGTATGTGGCCGTGGTGAAGCCGCTGCATTATAACTCTATCATCAGCACCAGAGTGTGCCTCACAATGACGACCACAGTCTGGGTGCTGGGCTTCCTCCTCCCCGTGTTGTCTGTGGTCCTGGCCAGTTCAGTGCCATTCTGTGCCTCCATCCATATCCTGCACGTTCTCTGTGAATACCCCTCTGTAATGACTCTGGCCTGCTCTGATGTGACGGCCCAGGTGACTTTTGCCATGTTACTTGTCAATATGGGTTCCTGGGGTccctttgtgtttgtgctgtttacCTACGGCAGGATCATAATATCGGTGGTGAAAATGAAAACGGTGGAGAGCCGGAAGAAGGCCTTCTTCATGTGCTCCTCCCACATAGTGGTGGTGATGCTGTACTACATCACCACAGCCATGGTATATATAGCGCTGAGAGTGGACAGCATCTCCCCAGATGGGCGTGTTTTAATTGGTGGGCTTTACTACTTCCTCACCCCCCTGGTCAACCCCATCATCTACAGCTTAAGGAATGAGAAGATCAAGGCAGCAGCTCAGAGGTACTTTGGACTCAAGTCTGCCTTTCCACATGGTGCCAAGAACAGTCTGCTGGCGGTACTGCTGGGCTACAACAGGATCTCATTCACAGGCTGCTTCATGcagatgtatttttacatttctttctgtgCCACTGAAGTTTTCGTCGTGGCGGCCATGGCTTACGACCGGTATGTGGCCGTGGTAAAGCCGCTGCATTATAACTCTATCATCAGCACCAGGTTGTGCTTCACGATGACGACCACAGTCTGGGCAGTGGGCTTCCTTGTCCCCTTGGTATCTGTGGTCCTGGCCAGTTTACTGCCATTCTGTACCTCCAATTATGTCTTACATTGTTTCTGTGACTACCCCACTGTAATGTCTCTAGCCTGTGCTGATGTGACGGCCCAGGTGAATTTAGCCCTGTTGATCGCCATGATGGGTGTCTGGGGGCCCTTTCTGTTTGTATTGTGGTCCTACTACAGGATCATAATATCGgtggtgaaaatgaaaactgtggaGAGCCGGAAGAAGGCCTTCTACATGTGCTCCTCCCatgtagtggtggtggtgctgcACTTCGTCTCCCAGGCTGTGGTGTATATAGGGCTGAGAGTGGAGAGCATTTCCCCCATTGGACGCATTTTCATAGGTGCGCTACACTACTTTCTCACCCCCCTGGTCAACCCCATCATCTACAGCTTAAGGAATGAGAAGATCAAGGCAGCAGCTCAGAGGTACTTTGGACTCAAGTTTGTCTTTCCACACACTGCCAAGAACACTATgtactttttcatttcagtcacTGCCACTGAAGTTTTCCTTGTGGCGGCCATGGCTTACGACCGGTACATGGCTGTGGTGAAGCCACTGCATTATAACACCATCATCAGCACCAGGGTGTGCCTCACGATGACGACCACAGTCTGGGCACTGGGTTTCCTTGTCCCCCTGGTGTCTCTGGTCCTGGCCAGTTCAGTGCCATTCTGTACCTCCAACTATGTCTTACATTGTTTCTGTGACTACCCCTCTGTAATGTCTCTAGCCTGTGCTGATGTGACGGCCCAGGTGAATTTTGCCCTGTTGCTTGTCATGATAGGTGTCTGGGGGCCCTTTCTGTTTGTATTGTGGTCCTACTACAGGATCATAATATCGgtggtgaaaatgaaaactgtggaGAGCCGGAAGAAGGCCTTCTCCATGTGCTCCTCCCatgtagtggtggtggtgctgcACTACGTCTCCCGGGCTGTGGTGTATATAGGGCTGAGAGTGGACAGCATTTCCCCCATTGGACGCATTTTCATCGGTGCGCTGTACTACTTCCTCACCCCCCTGGTCAACCCCATCATCTACAGCTTAAGGAATGAGAAGATCAAGGCAGCAGCTCAGAGGTACTTTGGACTCAAGTTTGTCTTTCCACACACTGCCAAGAACACTTTCATCATTGTGGGAGTGCCAGGCCTCCAGGAGCTCTACACCATActcttcttcatcttcctcttcctcttcctggcCACCATCCTGGGGAACCTGCTGATCGTGGTGCTGGTGTCCAGGGACCCCCGGCTTCACACACCAATGTACTTCTTCCTGTGGAACCTGGCTATCGCGGATATGCTGCTGACCATTACCATCACACCCAAACTGCTCGCGGTGCTGCTGGGCCACAACAGGATCTCCTTCACAGGCTGTTTTCTGCAGAtgtactttttcatttctttctgtgCCACTGAAGTATTCCTTGTGGCGGCCATGGCTTACGACCGGTACGTGGCCGTGGTGAAGCCACTGCATTATAAGTCTATCATCAGCACAAGGGTGTGCCTCACGATGATGGCCACAGTCTGGGTGCTGGGCTTCCTTGTCCCCTTGGTATCTGTGGCCCTGGCCAGTTCAGTGATATTCTGTACCTCCAACTATGTCTTACACTGTTTCTGTGACTACCCCACTGTAATGTCTCTAGCCTGTGCTGATGTGACAGCCCAGGTGAATTTTGCCCTGTTTCTCGCCATGTTGGTTGTCTGTGGGccctttctgtttgtgttgtggtctTACTGCAAGATCATAATATCAGTGGTGAAAATGAAATCCATGGAGAGCCGGAAGAAGGCCTTCTACATGTGCTCCTCCCACGTAGTGGTGGTGGTCCTATACTATGTCTCCACGGCTGTAGTGTATATAGGACTGAGAGTGCAGAGCATTTCCCCCATTGGACGCATTTTCATCGGTGCGCTGTACTATTTCCTCACTCCCATGGTCAACCCCATCATCTACAGCTTAAGGAATGAGAAAATCAAGGCGGCAGCTCAGAGGTACTTTGGACTCAAGTCTGCCTTTCCACACACTGCCAAGAACACTACCCTGTGTGTCATGAGTGACCCCAACACCTCCCTGCCCTCAGCCTCCTATTTCATCATCGTGGGAATGCCAGGCCTGCAGGAGCACTACACCACACTCTTCCCCATCTTCCTGCTCCTCTTCCTGGCCACCATTCTGGGGAACCTGCTGATTGTGGTGTTGCTGTCCCTGGACCCCCGGCTTCACACACCCATGTACTTCTTCCTGTGTAACCTGGCTCTCCTGGATATGCTGCTGACCATTACCATCATGCCCAAGTTGCTGGCAGTGCTGTGGGGAAATAACAGGATCTCCTTCACTGGCTGCTTCCTGCAGATgtactttttcatttcaatcagTGCCACTGAAGTTTTCCTCGTGGCGGCCATGGCTTACGACCGGTATGTGGCCGTCGTGAAGCCGCTGCATTACAACTCTGTCATCAGCACCAGGGTGTGCCTCATGATGATGTCCACAGTCTGGGTGCTGGGCTTCCTCCTCCCTGTGGTGTCTGTGGCCCTGGCCAGTTCAGTGCCATTCTGTAGCTCCAACCATGTCCTGCATGTTGTCTGTGACTACCCCACTATAATGTCTCTAGCCTGTGCTGATGTGACGGCCCAGGTGAATTTAGCTCTGTTGATTGTCATGATAGGTGCCTGGGGACCCtttgtatttgtgctgtttACCTACTGCAGGATCATAATAGCGgtggtgaaaatgaaaactgtggaGAGCCGGAAGAAGGCCTTCTACATGTGCTCCTCCCACatagtggtggtggtgctgtACTACGTCTCCACGGCTGTGGTGTATATAGGGCTGAGAGTGGACAGCATTTCCCCCGATGGGCGTGTTTTCATTGGGGGGCTGAACTACTTTCTCACCCCCCTGGTCAACCCCATCATCTACAGCTTAAGGAATGAGAAGATCAAGGCAGCAGCTCAGAGGTACTTTGGATTCAAGTTTGTCTTTCCACAGGGTGCCAAGAACACTGTCAGGGCTGCCGAATAA
>TU84560
CTACACCACActcttcctcatcttcctcctcctcttcctggcCACCATCCTGGGGAACCTGCTGATCATGGTGTTGCTGTCCCTGGACCCCCGGCTTCACACACCCATGTACTTCTTCCTGTGTAACCTGGCTGTCCTGGATGTACTGCTGACCATTACCATCACCCCCAAGCTGCTGGCGGTACTGCTGGGCTACAACAGGATCTCATTCACAGGCTGCTTCATGcagatgtatttttacatttctttctgtgCCACTGAAGTTTTCGTCGTGGCGGCCATGGCTTACGACCGGTATGTGGCCGTGGT

Function

GO: NA

KEGG:

id description
K04257 OLFR; olfactory receptor

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014099 True 4242 mRNA 0.52 5 1479919 1497604
TU84560 False 309 TUCP 0.54 1 1483785 1484093

Neighbor

gene id symbol gene type direction distance location
AMCG00014089 NA coding upstream 46311 1412350 ~ 1433608 (+)
AMCG00014094 NA coding upstream 87981 1390961 ~ 1391938 (+)
AMCG00014093 NA coding upstream 97439 1381500 ~ 1382480 (+)
AMCG00014092 NA coding upstream 98429 1371192 ~ 1381490 (+)
AMCG00014088 NA coding upstream 125352 1353590 ~ 1354567 (+)
AMCG00014096 NA coding downstream 43806 1541410 ~ 1545225 (+)
AMCG00014095 NA coding downstream 47723 1545327 ~ 1564574 (+)
AMCG00014100 NA coding downstream 302078 1799682 ~ 1813298 (+)
AMCG00014101 NA coding downstream 328251 1825855 ~ 1833360 (+)
AMCG00014102 app coding downstream 361074 1858678 ~ 1869442 (+)
G67699 NA non-coding upstream 203703 1275991 ~ 1276216 (+)
G67698 NA non-coding upstream 229605 1250099 ~ 1250314 (+)
G67690 NA non-coding upstream 457106 981839 ~ 1022813 (+)
G67685 NA non-coding upstream 675173 804537 ~ 804746 (+)
G67684 NA non-coding upstream 678455 801264 ~ 801464 (+)
G67792 NA non-coding downstream 322969 1820573 ~ 1821758 (+)
G67789 NA non-coding downstream 342561 1840165 ~ 1842445 (+)
G67882 NA non-coding downstream 579699 2077303 ~ 2077602 (+)
G67899 NA non-coding downstream 650845 2148449 ~ 2148654 (+)
G67907 NA non-coding downstream 835887 2333491 ~ 2333944 (+)
AMCG00014061 NA other upstream 1232917 136864 ~ 247002 (+)
G67577 NA other upstream 1372797 58449 ~ 107122 (+)
AMCG00014104 cyyr1,LOC107751099 other downstream 337828 1835432 ~ 1838125 (+)
G67801 NA other downstream 381487 1879091 ~ 1881041 (+)
AMCG00014111 NA other downstream 402616 1900220 ~ 1902687 (+)
G67896 NA other downstream 629268 2126872 ~ 2130145 (+)
AMCG00014146 NA other downstream 1209236 2706840 ~ 2710329 (+)

Expression


Co-expression Network