AMCG00014132


Basic Information

Item Value
gene id AMCG00014132
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 2542918 ~ 2548184 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014132
ACCAGGGTCACTCCACCAGGCACCGGCAATATCAAACGCATAAGACCTAGAATAGGCATCTGATTTGATTGGGTGTAATGGCCAGAGACCCCTGTACTTGTGTTCCCACTGAGTTTCATACAAGTTTTATATCCGACTTACTTTAGCGCTTGGAGCCGCACACGGATTCATCGATCGAATGACTGCAGACAGTATTTGGTCACTTTGTGTCAGCGTTGTGTTGTGTCCGACATCATATTTTatctttcactttcacttttacTGCGTAGTTGAATAACGACTGAAAAATGtagtaaattaaatacatttggaatcAACACCTATACATACGACCCGAATGACGTTCGAAAATAAATGTCACCCTGAtagttaaaaattaaaaagccgATTTATTTGGTGTTGGTCTGTCTGGACCGGCCGCTCTTTCTCGCCGACGAGGGACGGGTAGGACGGACTGCCAGCGTCCGGGAGAAATGACATCGATGATGGAGACAAACGGGCTGATCGATTAGGGATGGCGGATCGATCCAAAGTATCGATACTTCCGATACCGACGTTTCATTTTTGAGAATCGATCCTCACATCACAATATCGATACCAGGTGGTGACAGAGTGAAGCAGAGCTCTCTGACAGAAGCCTTCAGACAGGCAGGTATTATCCAGATATTCAAGAAGAATTGCATCTCAGAATGATGACCTCTCCCTtgctgtCTGTGGCTCTCCTGGAGGTGCTGATCCTGCACAGCTCCTGCTGTTTGCAAGgCGGGGGCGTGGTGCTGGGCCAGTCTGGACAGGATGTGCTGTTGCAGTGCCTGTTCCCCCCTCAGCCCCGCTCTGCGCACAGCTACCTGGTGGTGCGCTGGGCGAGGGACTACATGGTGGTCCACTACAGCCTGGATGGGCAGGAGCTGCCAGAGTACCAGCCTGAGGCGCTGAGAGGCCGCACACAGTTGTCCGCAGAGCTGCTGGCCCAGGGCAATGCCTCGCTGCTGCTCCACAGCGCCACCCCTGGAGACTCGGGGAACTACACTTGCAGTGTCACGGGCAACACGCTGCGGGCGACGCACACGATACATCTCCATGTCGAAGGATTGACCTTCTCGTCCTGTATCTCCAAACCCCAGGTGTTCTGTGCCATCCTGCtggtctgtctgtttgtgttcaaGAATCTCCGTGGACGAATCGGAGGGTTTTTGCCTTTCATTGTCCAGGAACCGGCCATCACCCCTGGAGTCACCGTCCCACAAACATTGGATCAGAAGAAAGAAATGCCCCCAACGAAAccaaaaacagaatgaaaataaatgtgtattgttcAAAGACGGTGCCTGCAGTTGGTCTCTTTTCTCCAGTCTCAGGGA

Function

GO: NA

KEGG:

id description
ko04612 Antigen processing and presentation
ko05340 Primary immunodeficiency

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014132 True 1361 mRNA 0.51 7 2542918 2548184

Neighbor

gene id symbol gene type direction distance location
AMCG00014138 NA coding downstream 203731 2325102 ~ 2339187 (-)
AMCG00014136 NA coding downstream 263935 2268517 ~ 2278983 (-)
AMCG00014133 NA coding downstream 365614 2176819 ~ 2177304 (-)
AMCG00014118 NA coding downstream 388172 2151885 ~ 2154746 (-)
AMCG00014116 NA coding downstream 496671 2038470 ~ 2046247 (-)
AMCG00014131 NA coding upstream 14349 2562533 ~ 2570391 (-)
AMCG00014141 NA coding upstream 26279 2574463 ~ 2576803 (-)
AMCG00014143 NA coding upstream 67071 2615255 ~ 2615530 (-)
AMCG00014145 NA coding upstream 83474 2631658 ~ 2635316 (-)
AMCG00014142 NA coding upstream 119797 2667981 ~ 2675410 (-)
G67911 NA non-coding downstream 169589 2350125 ~ 2373329 (-)
G67881 NA non-coding downstream 483427 2056849 ~ 2059491 (-)
G67849 NA non-coding downstream 600498 1942027 ~ 1942420 (-)
G67818 NA non-coding downstream 721159 1820612 ~ 1821759 (-)
G67691 NA non-coding downstream 1444939 1097656 ~ 1097979 (-)
G67953 NA non-coding upstream 60085 2608269 ~ 2608479 (-)
G68057 NA non-coding upstream 148624 2696808 ~ 2701159 (-)
G68061 NA non-coding upstream 159633 2707817 ~ 2710329 (-)
G68070 NA non-coding upstream 210301 2758485 ~ 2758840 (-)
G68073 NA non-coding upstream 217006 2765190 ~ 2766174 (-)
AMCG00014134 NA other downstream 221 2531954 ~ 2542697 (-)
AMCG00014119 NA other downstream 417965 2085941 ~ 2124953 (-)
G67843 NA other downstream 624736 1916727 ~ 1918182 (-)
G67832 NA other downstream 640303 1900640 ~ 1902615 (-)
G67835 NA other downstream 650365 1892063 ~ 1892553 (-)
AMCG00014144 NA other upstream 92875 2641059 ~ 2653247 (-)
G68088 NA other upstream 277378 2825562 ~ 2829144 (-)
AMCG00014181 ppef1,LOC105893339,LOC108425737,LOC107695075 other upstream 837573 3385757 ~ 3394754 (-)
AMCG00014228 NA other upstream 3110888 5659072 ~ 5678499 (-)
AMCG00014241 NA other upstream 3511305 6059489 ~ 6108358 (-)

Expression


Co-expression Network