AMCG00014134


Basic Information

Item Value
gene id AMCG00014134
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 2531954 ~ 2542697 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014134
ATGTTCCAGAACACAGTTGCATTGCAGGGCACACAGATAAACCTGCCCCCAGCCCATGCAGACAGGACACAGCTGTTCTTACCTGCCACTGCCACCATCAGCAATAAAAGGATCTTCATCTTCCTGCCGGGCCCTAGACCCCGCCCCAGGGCAGGCATGGGAGTCAAGGTCATTCgtcTGTCCACAGCACAGGACATTGAGCAACAGGCCCTACAAGAGGAGCAGCTGGAACCCGTGTCCCTCCAGATTGGTGCCGAGGTCGTTGCTGAGTCTGATCTGGTGTTGGACCCCGCTGCCGACAGCCAGGAGTTTGATCCCTCCAACAGCCCCAAGAgtcAATGCTGGGGGTATGAGATCAATGGAAGATGCTACAGGTTCTATTCTGCACCTAGGTCATATATCCAAGCTGAGCTGTTCTGTCAGAACCAGTTCCATCAGGGTCACCTGGCCTCTGTGAAAGACAACGCGTTGCAGAGTAAGCTGGTGTCTCTGGTCATCAGTACCCACGGCATGCTGGAGCCCACCTGGGTCGGTGGCTTTGACTACATGGAGACTGGGAAGTATGTCTGGACAGATGGCACCACATGGAGATACACCAACTGGGCAAGCAGTGAGCCTCAATACCCTGGACAGGACCGCTGCCTGGAGATCTTCCGCACTGgaaACCTGTGGAACACATCCCCCTGTTCCTTTCAAAGACCCTTCATCTGCTCCTACCCCATGTACTAATGccccctgacctctgaccttggGACCCCTACTTTCACGTGGACCCCCCAAACACCCCTGCCTAGTCTCTCAGTCCTGTGGGCCGTGGAAGAAGGTGAAAGAAGTCAGACAGCTTCTCTCCACTGTCTGGATTAGAGATTAAACACTCTGTCagtctgtgttttttatatatatgtattgctgCATACTCTCTGCGATGTACTATGTTAATGAAAATGCTTATACAGTAAAAACTCATTTTAAGTTGTGTTAGTAAAGAGCCAGCTGAGCAGAGGACCAGAGTTCTGTCCGTGACTTTTTCCACTGTCTGTGGTTTTTCTTGTGTGCATTcctgttttgtaaatgtttaatgccgtgattaataaaataataaataaggagACATGgaagaattattattactaattacattttttttacaatgaacATATTATATTTGCCACCATTGAGCAATATGTCATGttgatgttgtgttgtgtatttccAGAAAAGAAAGCCTAGTTGCAATAATTTTGCTGTAGACAACAGGACCTGAGACGCAGACCGAGCCTCTGCCAGGCCTCTCACTCGATGCTGGCTTCGTGTGGTAATGCAAGTTTCAAGTAGCAGTGTTTAGAGCCATGCGGAAGGCTGCagctgcaaataaatgtaatttattcagCCCTCCA
>TU84851
TTGactccaatttatttttatttacagacttacacaatgaaaaacaacagaaactaaAATGATGTTGCACAGTTAGACCAGCAGATGATGCTTCCTAGGGCAGAGGTCACAGCAGGGGATTAAACAAGCtgttaattcaaaatacatatacaaaaaatgaCTTGAATTCCAAAAGGTTAAACAATAATAAGACACAGGAGAAAATCCTGTGGCTTTCCCAGAGGGCTGTGTGGCTGCAGTGGGAGTGGGTGTGGGCCGCAGTGGGCAGGGGGGTGTCCCGTCTCTTGCCCTGCGTTCGGTCAGCCGCTGTAAGGGTAGGAGCAGATGAACGCCTGCCTCTGGGTGCACTCTGTGTCTCTCCACCAGCTGTTCCCTTGCTCCCATCTCCACGCAGAACTGTCTGTTGTTCAGGTTGTTGGGCTCGCCAGACATCCAGTCAGAGTAGCTCCAAAAGGACCCATCCAGCCACAAGAAGCGACCTTTTTAAAGTTATACGCGCCGATCCAGGTAGGGACTCGGTCCCCGCTGGACGCAATGACCAGGTTCATCAACTTTCCATGCAGGTCACGGTTGGTCACCGAGGCCAGGTGTCCCCCTGGGAAATTGTCACGGCAGAAGAACTCAGATTCGGGGACTGGGCCGGACTCAGCCACTGAGGAACACACACAATGCATGACTGTTATTGCTGCTCTACTTGTAAGGCGTAAAAGTAAAACAGTTGCagtaatggaaataataataataatatcctttTCATCCATCCAATTTCAATAACCACTTCTTCTGGTGCAGTTTCTCTGGGATTTGCTTTACAGTAATGATAATATTAGCAATATGTAATTATAGTACTAATCTTAGGGTTAGTGATTGATATAGAGATTGATACATGGATGTGCTGGATGTTGTATAATGGTGAGGCTGTGCTTGTTTGATTAGTATTGTCTAAGTGAGATGGATTGGATCAGACTAGTTGATTCATCAAGGAAGAACCAaactccctttctctctccttctcccccctCCACCCCGGCCTGTTCCCTGCCATCTCCTCACCCACAGCGATGTTGGAGACCTGCTCCTCTGCTTCCAGCAGGCTGTTGCTGGCTTCTTCTCTCAGTATGGGCAGCACTGGCTCGGACTCGGCGACTGGGCTGGATTGAGCCACTGAGGAACACAAACACCATGCATGACTGATATTGCTGCTCTCCTTGTTCTTATTGCTATATTCATAACATATTGCTATTAAGTGTGGCACGTGGGTTATGGAGGACAGGCTGAgaaggttaaaaaataattgagagaACAGATCAGAAAAGAAACCTGCAAAATGTTCCAGAACACAGTTGCATTGCAGGGCACACAGATAAAC

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014134 True 1397 mRNA 0.48 7 2531954 2540358
TU84851 False 1369 TUCP 0.47 4 2540317 2542697

Neighbor

gene id symbol gene type direction distance location
AMCG00014138 NA coding downstream 192767 2325102 ~ 2339187 (-)
AMCG00014136 NA coding downstream 252971 2268517 ~ 2278983 (-)
AMCG00014133 NA coding downstream 354650 2176819 ~ 2177304 (-)
AMCG00014118 NA coding downstream 377208 2151885 ~ 2154746 (-)
AMCG00014116 NA coding downstream 485707 2038470 ~ 2046247 (-)
AMCG00014132 NA coding upstream 221 2542918 ~ 2548184 (-)
AMCG00014131 NA coding upstream 19836 2562533 ~ 2570391 (-)
AMCG00014141 NA coding upstream 31766 2574463 ~ 2576803 (-)
AMCG00014143 NA coding upstream 72558 2615255 ~ 2615530 (-)
AMCG00014145 NA coding upstream 88961 2631658 ~ 2635316 (-)
G67911 NA non-coding downstream 158625 2350125 ~ 2373329 (-)
G67881 NA non-coding downstream 472463 2056849 ~ 2059491 (-)
G67849 NA non-coding downstream 589534 1942027 ~ 1942420 (-)
G67818 NA non-coding downstream 710195 1820612 ~ 1821759 (-)
G67691 NA non-coding downstream 1433975 1097656 ~ 1097979 (-)
G67953 NA non-coding upstream 65572 2608269 ~ 2608479 (-)
G68057 NA non-coding upstream 154111 2696808 ~ 2701159 (-)
G68061 NA non-coding upstream 165120 2707817 ~ 2710329 (-)
G68070 NA non-coding upstream 215788 2758485 ~ 2758840 (-)
G68073 NA non-coding upstream 222493 2765190 ~ 2766174 (-)
AMCG00014119 NA other downstream 407001 2085941 ~ 2124953 (-)
G67843 NA other downstream 613772 1916727 ~ 1918182 (-)
G67832 NA other downstream 629339 1900640 ~ 1902615 (-)
G67835 NA other downstream 639401 1892063 ~ 1892553 (-)
AMCG00014108 NA other downstream 646522 1879203 ~ 1885432 (-)
AMCG00014144 NA other upstream 98362 2641059 ~ 2653247 (-)
G68088 NA other upstream 282865 2825562 ~ 2829144 (-)
AMCG00014181 ppef1,LOC105893339,LOC108425737,LOC107695075 other upstream 843060 3385757 ~ 3394754 (-)
AMCG00014228 NA other upstream 3116375 5659072 ~ 5678499 (-)
AMCG00014241 NA other upstream 3516792 6059489 ~ 6108358 (-)

Expression


Co-expression Network