Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00014143 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 2615255 ~ 2615530 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0043473 | pigmentation | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00014143 | True | 276 | mRNA | 0.51 | 1 | 2615255 | 2615530 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014141 | NA | coding | downstream | 38452 | 2574463 ~ 2576803 (-) |
| AMCG00014131 | NA | coding | downstream | 44864 | 2562533 ~ 2570391 (-) |
| AMCG00014132 | NA | coding | downstream | 67071 | 2542918 ~ 2548184 (-) |
| AMCG00014138 | NA | coding | downstream | 276068 | 2325102 ~ 2339187 (-) |
| AMCG00014136 | NA | coding | downstream | 336272 | 2268517 ~ 2278983 (-) |
| AMCG00014145 | NA | coding | upstream | 16128 | 2631658 ~ 2635316 (-) |
| AMCG00014142 | NA | coding | upstream | 52451 | 2667981 ~ 2675410 (-) |
| AMCG00014150 | NA | coding | upstream | 116001 | 2731531 ~ 2734872 (-) |
| AMCG00014151 | NA | coding | upstream | 129815 | 2745345 ~ 2751995 (-) |
| AMCG00014155 | piga,LOC106582142,LOC102779826 | coding | upstream | 234882 | 2850412 ~ 2868349 (-) |
| G67953 | NA | non-coding | downstream | 6776 | 2608269 ~ 2608479 (-) |
| G67911 | NA | non-coding | downstream | 241926 | 2350125 ~ 2373329 (-) |
| G67881 | NA | non-coding | downstream | 555764 | 2056849 ~ 2059491 (-) |
| G67849 | NA | non-coding | downstream | 672835 | 1942027 ~ 1942420 (-) |
| G67818 | NA | non-coding | downstream | 793496 | 1820612 ~ 1821759 (-) |
| G68057 | NA | non-coding | upstream | 81278 | 2696808 ~ 2701159 (-) |
| G68061 | NA | non-coding | upstream | 92287 | 2707817 ~ 2710329 (-) |
| G68070 | NA | non-coding | upstream | 142955 | 2758485 ~ 2758840 (-) |
| G68073 | NA | non-coding | upstream | 149660 | 2765190 ~ 2766174 (-) |
| G68076 | NA | non-coding | upstream | 154308 | 2769838 ~ 2770660 (-) |
| AMCG00014134 | NA | other | downstream | 72558 | 2531954 ~ 2542697 (-) |
| AMCG00014119 | NA | other | downstream | 490302 | 2085941 ~ 2124953 (-) |
| G67843 | NA | other | downstream | 697073 | 1916727 ~ 1918182 (-) |
| G67832 | NA | other | downstream | 712640 | 1900640 ~ 1902615 (-) |
| G67835 | NA | other | downstream | 722702 | 1892063 ~ 1892553 (-) |
| AMCG00014144 | NA | other | upstream | 25529 | 2641059 ~ 2653247 (-) |
| G68088 | NA | other | upstream | 210032 | 2825562 ~ 2829144 (-) |
| AMCG00014181 | ppef1,LOC105893339,LOC108425737,LOC107695075 | other | upstream | 770227 | 3385757 ~ 3394754 (-) |
| AMCG00014228 | NA | other | upstream | 3043542 | 5659072 ~ 5678499 (-) |
| AMCG00014241 | NA | other | upstream | 3443959 | 6059489 ~ 6108358 (-) |
