AMCG00014144


Basic Information

Item Value
gene id AMCG00014144
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 2641059 ~ 2653247 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014144
CAGGGAGTAAAGATGCTGCTGCCGTGTTTATCTTTGTcagccctgctgctgctgctcttcccAGCAGCTCTGGAAGCTCAATTCCCTCGCGTCTGCACCACACCAGAAGCCTTGGAAACACGCACATGCTGCCCAGACTGGCAGGGGTCTCGTTGTGGTTACAGGGCTGGCCGGGGATTGTGTGCTACCTACAGTCTAATGTCCAATGCATACATAGACTACCGAGAGGACTGGCCCCATGCCTTCTACGACTCTGCATGCAGGTGCAACATAAACTTTGATGGTTTCGACTGCAGCCAGTGCAAGCCTGGGTTCAAGGGCCCACACTGTAATGAGATCCATAGCGTTGTGAGGAAGGAGATCACTAGTCTGACTGCAGAAGAGAAGTCCAGGTTCTTTACTGCGTTGGAGAAGGCAAAGCGCACTAACAGTGAAAAATATGTCATCCTCGAGAGCAATGACACATCTATAGAAGGCAACTATGAATTTAAGAACGCCACTGTGTATGATCACTATATCTGGCTGCACTATTACGCAGCAAAGCCGTACCGCAACTCTACGAGGAATGCTGCCCATCAGGGCCCAGCCTTCCCCTTCTGGCACAGAGTGTTCCTGCTGTTCATTGAGCGTGAGATCAGGGAGCTGACGGATGATGACTCCTTCTTCATCCCCTACTGGGACTGGACCAAGACAAATCACTGCAACATCTGCACCAATGACTACTTCGGAGTGAGTGATGAACACGGACACATACACAACGACTCGCTCTTCTCTGAGTGGAAGaccatGTGCACGTATGACAATGACACTCTTGGAAAAATATGCATATCACCAACTAAAACACCACTGCATCCTATAATACGCAACCCAGGCAAAGATATAGCAACTAAGCTGCTGCCGACTGTTTGCGATGTCCGTTACACTCTGGCAGCTGAGAAGTTCGACACGCCTCCTTATGACGGAGGTGCCAAATGCAGCTTCAGGAACAGGCTAGAGGGGTTTGACGTCCCACAGAACAACAGGCATCTCAACAGCTCCATGCATAACCTGATCCACGATTACCTCAATGGAACCATTTCCCACGTTCCCATCGCTGCGAATGACCCCATATTCCTCGTACACCATGCCTTTGTTGACAAGATTCTAGAAATGTGGCTGGAGACCCATCAAGATGCTCACTATCCAAATGATACCAACATCCCTAAAGCACAGAGGCCAAACTCCTACATGACTGCTTTCTTCCCTCTGAGACACAATGACAATTACTTCAATTTGAAAGTGTTAGACCTGGGCTACTCCTATGAATAAAACCACACCCAGCAGTCAGTGATTTGACATCAGCTCAGCATTGAAATGGAATTAGGCTTGTGGCTCAGTGTACCATCCTGCCCCACTGATGGTTTGCACTATATATGAGTCTGTAGAGTAGGATCAGTAGCACAGTTAAATTACAGTGAGGCTGATAGAGGATACCGATAGTCTCCTTGCACCTTTTCATGACAACAGCAAATGCCAGCATGACATTGACCTACAATGAATAAAATCAGTTGCTCATG
>TU84998
CTGCTTTTCAACActcataatgtattttaaccCTTTCAAAACCAAGGTAGCTCATCCTATCATCTATGCATAAATAGCAAATTGGTCACTATAAAATACTATGGGCAAAATAATTTTGAAGCAATCAAGATGAGCTACCCGCAGGTAGCCCAGGTTTATGGGCGTGTTTTGAAATTGTTAATTGCGCACTTTCGTTAGGAAGCTAATTCTGTCCagtagctcagtttgtcagaacaccggcCCTTATCGGGTGATCTATGCAGCCGATCAGAAAGGATTTTTTCGATTGGCTAGATTGGCAGCTCTAGAAGTCATGTGTTATCTATAGTAACAGCTTCTCCATTGGGCAATGCCAGCCTCATTGCGTACGGGATgtctaaaaccaggaagtacgcgatgtaaacaaaccgcacatgGCTGTTTTCAGCGGAATCTCAGCTACACAGGGTTTGACGTCCCACAGAACAACAGGCATCTCAACAGCTCCATGCATAACCTGATCCACGATTACCTCAATGGAACCATTTCCCACGTTCCCATCGCTGCGAATGACCCCATATTCCTCGTACACCATGCCTTTGTTGACAAGATTCTAGAAATGTGGCTGGAGACCCATCAAGATGCTCACTATCCAAATGATACCAACATCCCTAAAGCACAGAGGCCAAACTCCTACATGACTGCTTTCTTCCCTCTGAGACACAATGACAATTACTTCAATTTGAAAGTGTTAGACCTGGGCTACTCCTATGAATAAAACCACACCCAGCAGTCAGTGATTTGACATCAGCTCAGCATTGAAATGGAATTAGGCTTGTGGCTCAGTGTACCATCCTGCCCCACTGATGGTTTGCACTATATATGAGTCTGTAGAGTAGGATCAGTAGCACAGTTAAATTACAGTGAGGCTGATAGAGGATACCGATAGTCTCCTTGCACCTTTTCATGACAACAGCAAATGCCAGCATGACATTGACCTACAATGAATAAAATCAGTTGCTCATGCCTTATGCCTCGTGTTCTCCCATTCTTATCCTGGCTCTGCAGTGCAGCATGTCACACTCACACTACAGATGTACGGCAGGGGTGGAAACGTAGCATAATCAGTGGGATGCAAGTCCCTTTTACCACAATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014144 True 1556 mRNA 0.48 4 2641189 2653247
TU84998 False 1135 TUCP 0.44 3 2641059 2643907

Neighbor

gene id symbol gene type direction distance location
AMCG00014145 NA coding downstream 5743 2631658 ~ 2635316 (-)
AMCG00014143 NA coding downstream 25529 2615255 ~ 2615530 (-)
AMCG00014141 NA coding downstream 64256 2574463 ~ 2576803 (-)
AMCG00014131 NA coding downstream 70668 2562533 ~ 2570391 (-)
AMCG00014132 NA coding downstream 92875 2542918 ~ 2548184 (-)
AMCG00014142 NA coding upstream 14734 2667981 ~ 2675410 (-)
AMCG00014150 NA coding upstream 78284 2731531 ~ 2734872 (-)
AMCG00014151 NA coding upstream 92098 2745345 ~ 2751995 (-)
AMCG00014155 piga,LOC106582142,LOC102779826 coding upstream 197165 2850412 ~ 2868349 (-)
AMCG00014153 NA coding upstream 217214 2870461 ~ 2879884 (-)
G67953 NA non-coding downstream 32580 2608269 ~ 2608479 (-)
G67911 NA non-coding downstream 267730 2350125 ~ 2373329 (-)
G67881 NA non-coding downstream 581568 2056849 ~ 2059491 (-)
G67849 NA non-coding downstream 698639 1942027 ~ 1942420 (-)
G67818 NA non-coding downstream 819300 1820612 ~ 1821759 (-)
G68057 NA non-coding upstream 43561 2696808 ~ 2701159 (-)
G68061 NA non-coding upstream 54570 2707817 ~ 2710329 (-)
G68070 NA non-coding upstream 105238 2758485 ~ 2758840 (-)
G68073 NA non-coding upstream 111943 2765190 ~ 2766174 (-)
G68076 NA non-coding upstream 116591 2769838 ~ 2770660 (-)
AMCG00014134 NA other downstream 98362 2531954 ~ 2542697 (-)
AMCG00014119 NA other downstream 516106 2085941 ~ 2124953 (-)
G67843 NA other downstream 722877 1916727 ~ 1918182 (-)
G67832 NA other downstream 738444 1900640 ~ 1902615 (-)
G67835 NA other downstream 748506 1892063 ~ 1892553 (-)
G68088 NA other upstream 172315 2825562 ~ 2829144 (-)
AMCG00014181 ppef1,LOC105893339,LOC108425737,LOC107695075 other upstream 732510 3385757 ~ 3394754 (-)
AMCG00014228 NA other upstream 3005825 5659072 ~ 5678499 (-)
AMCG00014241 NA other upstream 3406242 6059489 ~ 6108358 (-)
AMCG00014271 NA other upstream 4724841 7378088 ~ 7386984 (-)

Expression


Co-expression Network