AMCG00014153


Basic Information

Item Value
gene id AMCG00014153
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 2870461 ~ 2879884 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014153
TCACATTTGAAACACATGCTTCTACTTGAATCCACAAGGTCTGTGCATGAGGGGGAGATTGGATTAAACATTCGAAGTAAGAATCCTGGGTGACTGAAGTCGCACTAACGAGGAAAAAGCAAAGCAGGAGCAACACTTAGGCATCACCTACCAGGGATATATTTAAGAGAAACCAGCATGTCAGTGCCGCGTACTTTGTAAATGAGGAGAGTGCTAGCTTTGCATGACTGAAAACGAGCATGTTGGCTACAACCTTCactttttcatttctgaaagAGATTTACTGAGCTTTCAGATCCTGATTTCAATATTGCACTTCATCAGAACCATCCACAGTTTTCAATATCCTTCTTAATCAACTTACTCTATTTCTGAAATCCTTTTTTTCACcctttgtattttgcatttaattaatttattttatttagttttaattttaggACTGAAAGGTCGGTGCATTCTAATGCATACTTTTCTAAGCTAACTAGTTATTTGCCAATTTTAAGAAGATTTGTTTAGGTTAAGCTTTCATCTATAAAGCAATATAATGCCTGTCTGACTGGTCCTGCTACAGAATAATTGCTGGATATCGAAGGAACAATGAAGATACACTTGTGTATCCTAATGCATCTGTTGGTGGTTTCATATGTACGGCTAATGCAGGGGACTGATAATCATAACTCTCCAAAGAAGCAGGTAGAGAACCAGGAAGCATGGGAAGAGATGGTTCGCTCTGCCTCGAGTCTGGAGGAGCTGTTGCAACTGACCGACTATCCAGACTGGAAGCTGTGGAAGTGCAGACTGAAGCTCCAGCAGCTGTTGTCCTCCCCGGAGTCGAGGACCTCCTCCTCGGCCTCGCACCGCTCCGCGCGCTACGCCTCCGCTTCCTACAATCTAGAAATCCTGAAAGTTATTGACGATGAATGGCAGAAAACACAGTGCATGCCCAGAGAAACCCATGTAGATGTGGCAAAGGAACTGGGCACCAGTACAAACATGTTCTTCAAACCcccatgtgtgtctgtcttcagGTGCAGTGGGTGCTGTAACAAAGAAGGCATGTCATGTAAAAACACAAGTTTTTCCTACGTTAATAAAACTCTTTTCACGTTTTCAATACCACTAAGAAAAGACCCTGAGCCAGTACTGATAAAGGTAGCCAATCATACCGAATGTAAATGCATGGAGCCCAGTGTGATCCGCCGGCACGTACGCCCACACCGAGGAAACAGATGTACTCTTGGACTCAAGAACCAAGGCCCACACAAGCTATGTGACAATGGCCTCATCTGGGACTGCATGTCATCGAAGTGTGTGCCATATCCCTCCACGAACAAGCAAGCAGACTTTTCTCCAGTTACCAAACTGTCAGACTGCGGGCCTCCCCGGATGTTTGATGAAAACCAGTGTGACTGTGTTTGTGGAAACAACTGTACCAGGAATTATACCATGAACCACAGAAACTGCAGCTGTCAGTGTTCCCTAAACAATGAGATCTGCGCCacagaaagcaaacattttGACCAGTTCTCCTGCAGATGTAAGTGAAACTGTTTGGGGACACGTACCGGGAAACTAAAAGACTGACAACAAAACCTTGAGAATCAAAGAAAAACCCTTAATTTATtgatacgtatatatatatattttatgttataatTGACCTACCCCACCTAACACACAtccatacacactcacacacaccatgCACATGGGACATTACTAAGTAAACaatcatgttttaacatgttaatGCGTTCTTTGTCTGTGTCATgctaatgttgtttttttaactcagCTTCCTGTAGGcactgaatacatatttttaatacattatatttttgtatttatcatagtgtttgttattgattttaagatatctatttaaatgtattttatgagaatattaaaatgtttgcatttttata

Function

GO: NA

KEGG:

id description
K05449 VEGFC_D; vascular endothelial growth factor C/D

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014153 True 1928 mRNA 0.41 7 2870461 2879884

Neighbor

gene id symbol gene type direction distance location
AMCG00014155 piga,LOC106582142,LOC102779826 coding downstream 2112 2850412 ~ 2868349 (-)
AMCG00014151 NA coding downstream 118466 2745345 ~ 2751995 (-)
AMCG00014150 NA coding downstream 135589 2731531 ~ 2734872 (-)
AMCG00014142 NA coding downstream 195051 2667981 ~ 2675410 (-)
AMCG00014145 NA coding downstream 235145 2631658 ~ 2635316 (-)
AMCG00014156 LOC102310267 coding upstream 630 2880514 ~ 2892222 (-)
AMCG00014154 NA coding upstream 13970 2893854 ~ 2904687 (-)
AMCG00014157 LOC106595857 coding upstream 50730 2930614 ~ 2935152 (-)
AMCG00014160 NA coding upstream 55721 2935605 ~ 2937871 (-)
AMCG00014159 ace2 coding upstream 58663 2938547 ~ 2940833 (-)
G68077 NA non-coding downstream 65297 2776259 ~ 2805164 (-)
G68078 NA non-coding downstream 68417 2782510 ~ 2802044 (-)
G68076 NA non-coding downstream 99801 2769838 ~ 2770660 (-)
G68073 NA non-coding downstream 104287 2765190 ~ 2766174 (-)
G68070 NA non-coding downstream 111621 2758485 ~ 2758840 (-)
G68124 NA non-coding upstream 149225 3029109 ~ 3032764 (-)
G68162 NA non-coding upstream 346981 3226865 ~ 3228150 (-)
G68224 rbbp7,LOC105893332,LOC100695351,LOC103023991,LOC106520888 non-coding upstream 583551 3463435 ~ 3464792 (-)
G68304 NA non-coding upstream 1077118 3957002 ~ 3957266 (-)
G68324 prps2,LOC108413289 non-coding upstream 1216331 4096215 ~ 4098475 (-)
G68088 NA other downstream 41317 2825562 ~ 2829144 (-)
AMCG00014144 NA other downstream 217214 2641059 ~ 2653247 (-)
AMCG00014134 NA other downstream 327764 2531954 ~ 2542697 (-)
AMCG00014119 NA other downstream 745508 2085941 ~ 2124953 (-)
G67843 NA other downstream 952279 1916727 ~ 1918182 (-)
AMCG00014181 ppef1,LOC105893339,LOC108425737,LOC107695075 other upstream 505873 3385757 ~ 3394754 (-)
AMCG00014228 NA other upstream 2779188 5659072 ~ 5678499 (-)
AMCG00014241 NA other upstream 3179605 6059489 ~ 6108358 (-)
AMCG00014271 NA other upstream 4498204 7378088 ~ 7386984 (-)
AMCG00014276 LOC106575771,LOC106574874,LOC107705522,LOC107584803,LOC105911816,LOC105019730 other upstream 4522268 7402152 ~ 7411890 (-)

Expression


Co-expression Network