AMCG00014166


Basic Information

Item Value
gene id AMCG00014166
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 3171834 ~ 3176055 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014166
GGCTCGCTTCCTCGGGGCGGCACTCAGGCGGGCAACTGCGAGGGATTGTGTTACGCGTCACCTCCAGCGCGCAGGCGCAGCAGCCGAGCGAACGTACGGAACGGGAGTGGCCTGGCGCGGGGGGGCCGGGGATCAAACGGGACTGCGGGCCGGCAGGACGTGCGGGATCCGGGGCGCAGCGGCACACGCACCGCCAGAGCAACAGCAGCCATGTCCGCATACGaTCATTTTCCTGTGAAGATTAAAGATGAGGAGGAGTACGAGCAGATCCTGGTCGCAGACCCGCAGAGTCACGGCGCGTCGGAGGAGACGGCGAGCGACCAGGACCAGCCGCCTGAGCCGGACTGCCCCAAAGCCTACTGTGTCCAGATGGTTTATGGTGATGCGCTGACTGGGAATCCATCGAACACCGAAGCCCAGCACAACGGCCGCGGGGCCGAGGAGGAGCGGTACAGCCCGAGAGCGAAGAGGAAGCGAGGCCCCGGCTCAGTCACAGGCAGCATGGTATGGAAGCCTGCACTGTGCTTTTGTGCAGCAAGTAAtataaaaactataatttaCACAGTCACGGCTCAGAGTCTAGGAGCCCTGGCACGTGTAGAAGACGTGAATCATCTGCAGCACGAGACCGACCTGCTGAGGATCCTGGGGGAAGAGGCGAAGGACGGTGGCATCTCCCAGCACCCTGCGCGCCTCCTGCGCCCGGAGGAGAGAGTCCTTGCCTTGATGACAGAGCTGGCTGGGGTGCGGCGAGTGAGCGCGGCCGGCACACCGCACACGCGGCTCCGCTCTCCTCCAGACCTGCAGCCTGCACAGCCAGTGGGGGTCCGGGGGGATACCGTGCCTTAAAGTGCCAGCAGGGAAATGGGTCCTTCCATAATCTTTCTTCACACTTCCGACCAGCCAGAGCCAGGGATCAACTGGGAAGTTTGTTTTCCAGCATCGAGTTCAACAGGAAATTGGGATCGCGATGGAAGCTGAGTTGTGCAGCATAAAACAAATCAGCCCCAAGACATTCATCGGGACCTGCTAAAGATGAGCTCCAACATGGCCCGTTTGTGTGACAGGATGGCTGCCCATGTTAATGCCCTGGTGGAGCAACAAACCCCAGCCCAGCCCGGCCACGATGCCAACACGGTCAAACCCGACCCAGAGGATCTTACTGCCCTGCAGACGGTCACCTGATCCATTGACTCCCGGCACACCGAGTCAGTAGTGGGACCCCGCACTCCAGGCCAAGCGTTGCAGGGGttctttcattttcatgcaCGCAAACCAACCAAGCTTTCACATCTAACTTACTTAGAAGttacttattatattaaatatttacagtataaacagaactgccattttaaaatgtcaacaaacattttcaaaaataaaaatatgtattctag

Function

GO:

id name namespace
GO:0061982 meiosis I cell cycle process biological_process
GO:0051321 meiotic cell cycle biological_process
GO:1903046 meiotic cell cycle process biological_process
GO:0006259 DNA metabolic process biological_process
GO:0006269 DNA replication, synthesis of RNA primer biological_process

KEGG:

id description
ko03460 Fanconi anemia pathway
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014166 True 1400 mRNA 0.58 5 3171834 3176055

Neighbor

gene id symbol gene type direction distance location
AMCG00014164 NA coding upstream 5617 3149895 ~ 3166217 (+)
AMCG00014162 nhs,LOC103378685 coding upstream 127089 3044338 ~ 3044745 (+)
AMCG00014163 NA coding upstream 141131 2996445 ~ 3030703 (+)
AMCG00014152 NA coding upstream 243524 2923400 ~ 2928310 (+)
AMCG00014161 NA coding upstream 256670 2909429 ~ 2915164 (+)
AMCG00014165 NA coding downstream 44148 3220203 ~ 3221921 (+)
AMCG00014171 NA coding downstream 163297 3339352 ~ 3370944 (+)
AMCG00014170 NA coding downstream 201637 3377692 ~ 3378273 (+)
AMCG00014174 LOC108425737 coding downstream 215552 3391607 ~ 3397123 (+)
AMCG00014175 NA coding downstream 222236 3398291 ~ 3409107 (+)
G68046 NA non-coding upstream 195324 2976214 ~ 2976510 (+)
G67994 NA non-coding upstream 369790 2782339 ~ 2802044 (+)
G67997 NA non-coding upstream 374025 2792742 ~ 2797809 (+)
G67988 NA non-coding upstream 402997 2767502 ~ 2768837 (+)
G67983 NA non-coding upstream 416350 2746244 ~ 2755484 (+)
G68151 NA non-coding downstream 48519 3224574 ~ 3226499 (+)
G68153 NA non-coding downstream 50804 3226859 ~ 3228126 (+)
G68166 NA non-coding downstream 198782 3374837 ~ 3375148 (+)
G68167 NA non-coding downstream 199530 3375585 ~ 3375789 (+)
G68189 NA non-coding downstream 234923 3410978 ~ 3483649 (+)
AMCG00014146 NA other upstream 461505 2706840 ~ 2710329 (+)
G67896 NA other upstream 1041689 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 1269147 1900220 ~ 1902687 (+)
G67801 NA other upstream 1290793 1879091 ~ 1881041 (+)
AMCG00014104 cyyr1,LOC107751099 other upstream 1333709 1835432 ~ 1838125 (+)
AMCG00014196 NA other downstream 951421 4127476 ~ 4131718 (+)
G68475 NA other downstream 1473145 4649200 ~ 4651964 (+)
G68830 NA other downstream 4170140 7346195 ~ 7349467 (+)
G68848 NA other downstream 4237585 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 4288448 7464503 ~ 7482560 (+)

Expression


Co-expression Network