AMCG00014198


Basic Information

Item Value
gene id AMCG00014198
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 4223544 ~ 4227643 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014198
ATGTGGCCACACGGCACTGCAGATCTCCAGATCACCGCTGCTCTGGAGCACCAGTCAAACGACAGGTTGCACATCGGTAGGTGTCATGTGACGATGGACACACGGGAGATCACTGATGGCGCTCATCACATAGAAAAACTTCTCAGAGAAAATAAGTATCCAGATATGATATCCCTGCTGGAGGACATAGACAAGTGGTCAGTTACAGTAGAGCAGCTTCAGGAAACAGATATCACTAAAGTGCTCTACAGGGTCCTGAAAACCTGCCCTGTGATTGAGTTGAAAAGGCAAGTGAAGCTTTTACTGTCAAAATGGAAGAAATTGTATGTTGGGTTTTGCTCTCAGACCTCGGCTCACCCTGCAAGAAGCGACAGCAAGGAGACGGTTTGTCCATCCTGTTTTAAGGCAGACACGAAGGAGACCGGCGCCATTTACTTTGCACAGTGTGAGAAGATCCGACCAGATTATAGCTCTAATGGTGGAGAAAGCAGATGTGAGCAGGAGAGTTTGTCTCTTCGTACAGTCGGTGGAAAGGACGCAGCCATGGGGGATCTTTCAGTTGTGGGTTGTGAGGGAAATGCCACACTGGTTAGCACTGAACCTGGCATAGTGGAGAGCTCCAGGACTGCAGAGACTTCTGAGGTGAACCTCGAGAAAGCCCAGATTAGTGTCGTCCCTGTGAGACCCAAATGCACCGAGCTGCTCTTTCAAGCTCTCCAGCCTGAAGGCGCTGAAGGGACAGAGTCCTCTGCGAAGTGTCAGGAAGTGGCCCAGGCTATCGAAGAGAGCATCTTTGTCCTGCACGGCAAGATGGACAAGAAATACAGATCTTGCATCAGGAGTAAAGTGGCTAATTTAAGGAACCCCAAGACTCCTCACCTGCGCCAAAACCTGCTGTGTGGCCGGATGAGTGCAAAGGCCTTTGCCGAGATGTCTGCGATGGAAATGGCAAGCGATGAGCTAAAGAGACTAAGGGAAGTGTACAGGCACTCGGCCATTAGTGAACATCAACTTCCGCAAAGGGTGGAAGGGACGAAGACCGATAAGATCCGGTGTAGGCGCTGTGAGAAGTTCGACTGCACTGTGACGGTCATCGCCAGAGGAACGCTTTTCCTTCCCAGCTGGGTACGGAATGGAAACCCAGATGAACAGATGATGACTTTTGTGATTTGTAATGCATGTGGAgagaagtggtacaacagtggATGGGTTTGTCTGTAACAACTGGCACAACCAGATGACGTAAAGTGGCAGCGTTTACATGCAAGTTTGATTTGTGTCAATGTTGTAACTTCAATCAGATTGAAATGGCTGAATTACAGACTAATCTTAAATTGGACGTGCTGTGAACAGTGCATGCTTACACAATGACTGCAAATGtggaataaaaatgtgttgataCTAATATCTGGTGAggattttgtcttttgtttccttttttttttttttgactgtTTGCATGTGTTTAGTGTTGCTTTATTTCACATGAGTTTGTAATGTTTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014198 True 1505 mRNA 0.47 3 4223544 4227643

Neighbor

gene id symbol gene type direction distance location
AMCG00014199 NA coding upstream 3420 4205155 ~ 4220124 (+)
AMCG00014197 NA coding upstream 104772 4106184 ~ 4118772 (+)
AMCG00014195 prps2 coding upstream 124603 4088363 ~ 4098941 (+)
AMCG00014194 NA coding upstream 141640 4046971 ~ 4081904 (+)
AMCG00014192 msl3,LOC106574410 coding upstream 273267 3933258 ~ 3950277 (+)
AMCG00014200 NA coding downstream 15167 4242810 ~ 4244022 (+)
AMCG00014201 rab9a,LOC106581920 coding downstream 63301 4290944 ~ 4291549 (+)
AMCG00014202 NA coding downstream 70698 4298341 ~ 4316679 (+)
AMCG00014207 LOC108443135,LOC102799111 coding downstream 233132 4460775 ~ 4498956 (+)
AMCG00014209 NA coding downstream 293159 4520802 ~ 4548407 (+)
G68317 NA non-coding upstream 139580 4083763 ~ 4083964 (+)
G68292 NA non-coding upstream 268279 3954366 ~ 3955265 (+)
G68189 NA non-coding upstream 739895 3410978 ~ 3483649 (+)
G68167 NA non-coding upstream 847755 3375585 ~ 3375789 (+)
G68166 NA non-coding upstream 848396 3374837 ~ 3375148 (+)
G68374 NA non-coding downstream 65683 4293326 ~ 4293526 (+)
G68376 trappc2 non-coding downstream 67174 4294817 ~ 4295819 (+)
G68422 NA non-coding downstream 273221 4500864 ~ 4550002 (+)
G68434 NA non-coding downstream 356831 4584474 ~ 4588428 (+)
G68473 NA non-coding downstream 420067 4647710 ~ 4648213 (+)
AMCG00014196 NA other upstream 91826 4127476 ~ 4131718 (+)
AMCG00014146 NA other upstream 1513215 2706840 ~ 2710329 (+)
G67896 NA other upstream 2093399 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 2320857 1900220 ~ 1902687 (+)
G67801 NA other upstream 2342503 1879091 ~ 1881041 (+)
G68475 NA other downstream 421557 4649200 ~ 4651964 (+)
G68830 NA other downstream 3118552 7346195 ~ 7349467 (+)
G68848 NA other downstream 3185997 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 3236860 7464503 ~ 7482560 (+)
G69406 tgfbrap1,LOC102780916 other downstream 5775415 10003058 ~ 10008648 (+)

Expression


Co-expression Network