AMCG00014199


Basic Information

Item Value
gene id AMCG00014199
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 4205155 ~ 4220124 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014199
GACTAGAAGCGGCCGTGATGCCCAAAAGACACTACAGACAAATCTCATCTGGTAATCCGGCGGGAGTGTGCCGCTATGGGAGGAGACTGGAGTGTTGCTATGGCTGGAAGAGGAACAGTAAAGGACACTGCGAAGCTCTCTGTGAACACGGCTGCAAACATGGGGAATGCGTGGGCCccaacaaatgcaaatgtttccCGGGATACACTGGAAAAACATGTAATCAAGATCTGAATGAATGTGGCCTGAAGCCCCGTCCCTGCGAACACAGGTGCATGAACACGCATGGCAGCTACATGTGCTACTGTCTCAACGGCTACATGCTGATGCCCGATGGCTCATGTGCCAACTCCAGGACGTGCGCCATGGCCCACTGTCAGTACGGCTGTCAGGAGGTTCATGGAGAGGTGCGCTGCCTCTGTCCGTCCACAGGGCTTCAACTGGGACCAGATGAGAGGACCTGTATTGATGTTGACGAATGCTCGTCAGGAAAGCTTCTTTGCCCCTATAACAGGAGATGCGTGAACACATTTGGAAGCTACTACTGCAAGTGCCAGATTGGTTTTGATCTTAAATATGTCGCTGGCAAATACGACTGTGTAGACATGGATGAATGTGCAAGCAACACTCACAAGTGCAGCCCCCACGCGGAGTGCCTCAACACCCATGGATCCTACAAGTGCAAATGCAAGCCAGGCTTCAGAGGCAGTGGGTTTGACTGCTCTGCCATCCCAGACAACTCTGTGAAAGAAGGCCCACGGATTCTAGGCGGCGGCAAAGATCCCATCACGAAGCTCGTCGTGGACAACAACAGCGAGCTCGACAACGAGCAGATCAAGAATGTCATCCCTGAGTCCAAGGTCACCACGCCCCCCAAAGCCCGCCAGCAGCCATTCGATTACGAGGACGGCATCTACATCGGAGGGACTGTGGAAGAGAAGGAGCTGGATGACGTGTCCTTGGAGGAACAAGACAACCTGAAGAACCAAATAGAGAAGAAGGAGACCAGCCCAAGGGGAGACGTGTTCATCCCCGAGGAGTTCAAGTCTGTTCTCGGTCCTCTCACTGTGGCGAAGGAAGCCCCAGCCGTGGTGCACAGTCAGGAAGAGTTCATCATCGACTGTAGCTTTGAGCAAGGAGGCTGTGAGTGGGTGCAGGACCCCGAGGACAACTTTGACTGGAACGTAGCCGACCACGATAACGGTGTTGGATACTACATGGCCGTCCCTGGTTTCGTCGGTGAAAGGAAAGACGTCGGCCGCCTGAAACTCCTCGTGAGCGACACCACGTCTCAGAAGGGTTTCTGTCTGACCTTCAACTACCGCCTGATCGGAGACCGGGTGGGCAAACTCCGAGTGCTGCTGGACAACAACGACTATCCGATCTGGGAGCAGAGCACGAGCCGAGCGGAGAGCTGGCAAACCGAACTCATCACTGTGTCCTGGAATGATTCCGCTCCAGAGAGCATCATTTTCGAGGCCGAGCGTGGAAAAGGCAAAGCTGGGGAGATCGGGCTGGACAACGTTGTGTTAACCTCTGGGTCCTGTCAAGAAGATGAATCAGTCATTTTT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014199 True 1571 mRNA 0.54 12 4205155 4220124

Neighbor

gene id symbol gene type direction distance location
AMCG00014197 NA coding upstream 86383 4106184 ~ 4118772 (+)
AMCG00014195 prps2 coding upstream 106214 4088363 ~ 4098941 (+)
AMCG00014194 NA coding upstream 123251 4046971 ~ 4081904 (+)
AMCG00014192 msl3,LOC106574410 coding upstream 254878 3933258 ~ 3950277 (+)
AMCG00014186 clcn4 coding upstream 576073 3617227 ~ 3629082 (+)
AMCG00014198 NA coding downstream 3420 4223544 ~ 4227643 (+)
AMCG00014200 NA coding downstream 22686 4242810 ~ 4244022 (+)
AMCG00014201 rab9a,LOC106581920 coding downstream 70820 4290944 ~ 4291549 (+)
AMCG00014202 NA coding downstream 78217 4298341 ~ 4316679 (+)
AMCG00014207 LOC108443135,LOC102799111 coding downstream 240651 4460775 ~ 4498956 (+)
G68317 NA non-coding upstream 121191 4083763 ~ 4083964 (+)
G68292 NA non-coding upstream 249890 3954366 ~ 3955265 (+)
G68189 NA non-coding upstream 721506 3410978 ~ 3483649 (+)
G68167 NA non-coding upstream 829366 3375585 ~ 3375789 (+)
G68166 NA non-coding upstream 830007 3374837 ~ 3375148 (+)
G68374 NA non-coding downstream 73202 4293326 ~ 4293526 (+)
G68376 trappc2 non-coding downstream 74693 4294817 ~ 4295819 (+)
G68422 NA non-coding downstream 280740 4500864 ~ 4550002 (+)
G68434 NA non-coding downstream 364350 4584474 ~ 4588428 (+)
G68473 NA non-coding downstream 427586 4647710 ~ 4648213 (+)
AMCG00014196 NA other upstream 73437 4127476 ~ 4131718 (+)
AMCG00014146 NA other upstream 1494826 2706840 ~ 2710329 (+)
G67896 NA other upstream 2075010 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 2302468 1900220 ~ 1902687 (+)
G67801 NA other upstream 2324114 1879091 ~ 1881041 (+)
G68475 NA other downstream 429076 4649200 ~ 4651964 (+)
G68830 NA other downstream 3126071 7346195 ~ 7349467 (+)
G68848 NA other downstream 3193516 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 3244379 7464503 ~ 7482560 (+)
G69406 tgfbrap1,LOC102780916 other downstream 5782934 10003058 ~ 10008648 (+)

Expression


Co-expression Network