AMCG00014213 (anos1,LOC104963477)


Basic Information

Item Value
gene id AMCG00014213
gene name anos1,LOC104963477
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 4723654 ~ 4746002 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014213
AGTGCCTGGAGCCGTGCAAGGAAGCCTGGGACCTGAAGGGGAATCAGTGCCAGAGCTTGTGTGAGCCTCTGTTTCCCAAGAAGCACTATGAGTGTCTGACGAGCTGCGAGTTCCTGAAGTCCGTCGAGGCGCTGAAGCAGGGCGACTGTCCCGCCCCGGAGAAGGCCAGTGGCTTCGCGGCCGCCTGTGTGGAGAGCTGCGAGGATGATGAGGAGTGCTCAGGGGTGAAGAAGTGCTGCTCCAATGGCTGTGGCCACACGTGCCAGCTGCCCAAGAACCTCTACAAAGGAGCTCCACTAAAGCCCCGGAAGGAACTGAGCTTCACTGAGCTTCACAATGGCCAGCTGGAGATCAAGTGGTCGTCCAAGTTCAACATCTCGGTGGAGCCGGTCCTCTACGTCGTGCAGAGACGGTGGAATTATGGGATACATCCCAGCGAGGACGACGCCACTGAATGGCAGACTGTGGGGCAGACCACAGAGGAGCGAGTGAAGCTGCTGGACATCAGAGCCAGCAGGTGGTACCAGTTCAGGGTGGCTGCTGTCAACGTTCATGGCACGAGAGGCTTCACCGCCCCCAGCAAGCACTTCCGCTCCTCCAAAGATCCCTCTGCCCCCCCCAGCCCTTCCAGCCTGAAAATCAGTAACATGACCTCGGGCCAGGACGGTGCCCTCTCCGCACGGCTCAGCTGGGATCTCACGGAGGAACCAGACATCCCTGTGCACCATTACAAAGTGTTCTGGAGCTGGACAGTCAGCGGGAAATCCATTGTGCCGacaaagaagaagaggagaaagaCCACCAAtgggTCCCAAAACTATGTGGATCTGGAAGGGCTCCAGCCAAACAGCAGCTATATGGTGGAGCTGCAGGCGGTGACATACTGGGGACAAGTGCGTCTGAAGAGCGCCAAGGTTTCTCTTCTCTTCAGCACCATGAGATTGAATGACACGAAAGAACATTCTTCCACTTCTTCAAAGATGAGGAAAGGAGGAGACGTTCATCCCATCAGCTCTAACCCAGGAAAGAGACCAAACGGCCCACTAGAGGTGGGAGCTCCTTTCTACCAAGATGGACAACTTCAGGTCAAGATCTACTGGAAGAAAAGAGGCGATCCCACGGCCAGCCGTTACCACGTCCAGTGGATGCCAGAATCCTGCAGTCACAACGAAACAAAAGGACCAGAGAAATCGGTTACACAGGAAAACTACATCAACCTCCACGGACTGCTGTTTTCCTGCAAGTACAAAGTGACAGTCCAGGCGATGAAGTCAAAGGGTCGCTCAAAGGCTGAGACCACCAGCTTCTCCACGCCACCCTGCTCCACCCTGAAGGGCAAGAGCCATAAACACATCAGCTGCCCTGCAGAGGGGGGGCTTCCAAAGGTCCTGGCCAAACCCGAGAACCTGACAGCTTCCTTCTTCATCCACGAAGGGAATATAACCGGAAATTTCTTTTGGAGGGTGTCGAGAGTACCAGTCCACCAGCGTGTCACCGGCTTTCAGGTCACCTGGGCCGAGGTCACCACGGAGAGCCGGCAGAACAGTTTGCCGAACAGTATCATCTCCCAGTCCCAAATACTGCCTCCGGACCACAGTCTCCTCATAGTCTCCAATTTACGACCAGCAACCTTTTACAGACTTGAAGTGCAGGTCATAACAACTGGAGGGGAAGGCCCAGcaactgtaaaaacatttcaaacacctGACATTTCACCGGTTCTGCAGCACAGTAAGCACATTTTGACTCTTAATTCACTGTATAGCCTACAAAAGGATGCAAGTGAGTCCCCATGAGAAGGAAggcctttttatttaataccaCTGTGgtctacaaatgacaaaaaaccCTGTCAGATATACAGGGATATGGAAAATAACAAGATGGTCTCTTGTGCCAGTACCATTTGTTCTCCCATAAATAGTTATGTAGCACTCAAGCATTACATCACTGGACATATGGCAGTTAAAACAACTAACAAGCGCCATTAAGGGCTGTAAACGCGGGCCAACGTTGGTCTTCTGGCCATTTGTGCTGAGcgcttaattgtttttttaagactgtttatttatttatggcttTGCGACATGGGACTTGGCTGGAATCACAATCCCCTTAACCGTGTCACTTCCCATCGCCTGTGATCGTCAAAGCCAGTTGTCGACTGGGATAATCCTCAAATTAAtccctttttaaaatggtttccggtaaaaaaaggttttgaaatCATGCCTCCTCTTCAATTAAAcctataaaaaaatgtatttataatatattgcaaaaaCAAGTGAACCATATAACACGTTTTGCAGATTGCTTGTTTATGTCGGCTTCATTTTTAAGATTCTGTAATGGCCTGCTGGATGTTATATGAGCCTGTGTGCatggtttgattttaaatgaattatataattCCCTTATACGTTTTATTTATTGGTGACGGGGTATCTGGTTAATAAGGTTAATTCGAAAGCCTTCAAAAAGGGCTATTGTGTGGAAATTAATTGTGATGTGTTCCAGCATTCAGATCTGATATGTCTGAAATGATTCAAGTGCTTTGTTTACacagtttgtgttgtttttgttgttgtttagggCCCAGACTCAGACAACACCATCAGCACCATCATAAGCAATCTTCAGAAAAGCACTGAAGACTTCCTTGCATCGGTGTGGCAGAGACCAGCTCAGCCCCAAATCGCaccacaaataaatcaatacttaaatataaaaaggaaatagaCTATGTAATTGCGCTAATCCACTGCAGGTGGGTTTTCTCTTCCTCCGGACAGCGCGTCACCGATCACATCGCCCACCCCCGCTCCACTCACTGCGTGGTATTCACCCGATTTAACGGCACAGCCCACAACGGACACACTGCCAATCCCAAAAACCTGCCGGACGAATCACTGGGGCAATTGGAGATCTCTTCACATGCGCCCTGCGGAGATTTGCACTTCTTTGGCTCTCAAATAAAGTTACAAAACAACCATGTAATCCATAAGCTTCGAGTATGTCAAGTCAGACATAAAACTAGAGTGAGGGGAGGGGGTGTAGAACTTCAGAGTTGAGAGAATTTCAATCGCCATCTTTAAGACCAGCTTTGGATTGGACTATTTATTATATCGTACTCCTTAATCCCAATTGGCGCTTAGTAATAATTAACTAAAACCGATTTACGATGTAACTAATGCCTGAGCGGTTTATCAGAGAGTACGGCATCACTTAGGATATTGCATGTTGGAacccatttaatttaaactgtaaatgcGTAGCAGCGACAAACTGAATCTTACAGTCAATGGTCTTGCATGACAAAACTTAGTGTTCTGTTCTAGGCATGAGATGAACTGTCTGTGTTACCTCCTTTGAATATATTAGCAAACATTCAATTAACAGATTAACAGAGGACTCCTTGGGGGGggattatttactttatattaatGGAATGATACCGTAGTGTGGAAATGACAGAATTGTGTATTTACTAAACTGGCTGTAGAAATCATGCTCATGTTACAGTCATtaaatgtcaatatttatttatgtatgtattacaacatgtttggtttgtgtgtgtgtgtgtgtgtgt

Function

symbol description
anos1 Predicted to be an extracellular matrix structural constituent. Predicted to be involved in neuron differentiation. Predicted to be located in extracellular matrix and extracellular space. Predicted to be active in cell surface. Implicated in hypogonadotropic hypogonadism 1 with or without anosmia.

NR:

description
PREDICTED: anosmin-1

GO:

id name namespace
GO:0010466 negative regulation of peptidase activity biological_process
GO:0005576 extracellular region cellular_component
GO:0030414 peptidase inhibitor activity molecular_function

KEGG:

id description
K23413 ANOS1, KAL1, WFDC19; anosmin-1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014213 True 3595 mRNA 0.47 11 4723654 4746002

Neighbor

gene id symbol gene type direction distance location
AMCG00014208 NA coding upstream 140445 4568669 ~ 4583209 (+)
AMCG00014209 NA coding upstream 175247 4520802 ~ 4548407 (+)
AMCG00014207 LOC108443135,LOC102799111 coding upstream 224698 4460775 ~ 4498956 (+)
AMCG00014202 NA coding upstream 406975 4298341 ~ 4316679 (+)
AMCG00014201 rab9a,LOC106581920 coding upstream 432105 4290944 ~ 4291549 (+)
AMCG00014214 NA coding downstream 91721 4837723 ~ 4851433 (+)
AMCG00014216 hdd1a coding downstream 205328 4951330 ~ 4958249 (+)
AMCG00014217 NA coding downstream 315830 5061832 ~ 5062272 (+)
AMCG00014218 NA coding downstream 333507 5079509 ~ 5079783 (+)
AMCG00014220 nlgn4,nlgn4x coding downstream 368648 5114650 ~ 5118152 (+)
G68473 NA non-coding upstream 75441 4647710 ~ 4648213 (+)
G68434 NA non-coding upstream 135226 4584474 ~ 4588428 (+)
G68422 NA non-coding upstream 173652 4500864 ~ 4550002 (+)
G68376 trappc2 non-coding upstream 427835 4294817 ~ 4295819 (+)
G68374 NA non-coding upstream 430128 4293326 ~ 4293526 (+)
G68497 NA non-coding downstream 39324 4785326 ~ 4785601 (+)
G68509 NA non-coding downstream 111027 4857029 ~ 4857230 (+)
G68538 NA non-coding downstream 705286 5451288 ~ 5451521 (+)
G68559 NA non-coding downstream 911248 5657250 ~ 5704009 (+)
G68589 NA non-coding downstream 1033376 5779378 ~ 5782386 (+)
G68475 NA other upstream 71690 4649200 ~ 4651964 (+)
AMCG00014196 NA other upstream 591936 4127476 ~ 4131718 (+)
AMCG00014146 NA other upstream 2013325 2706840 ~ 2710329 (+)
G67896 NA other upstream 2593509 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 2820967 1900220 ~ 1902687 (+)
G68830 NA other downstream 2600193 7346195 ~ 7349467 (+)
G68848 NA other downstream 2667638 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 2718501 7464503 ~ 7482560 (+)
G69406 tgfbrap1,LOC102780916 other downstream 5257056 10003058 ~ 10008648 (+)
AMCG00014345 NA other downstream 5401977 10147979 ~ 10151913 (+)

Expression


Co-expression Network