AMCG00014223


Basic Information

Item Value
gene id AMCG00014223
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 5607773 ~ 5643489 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014223
ATGTACGCCCGAGGAACTGCCCAGCTAAGTGCAGAGAATACTCACGGCGACAGGAAGTGGGTTCCAGAGTGGGGCGCTACGCAGCCGAAGGAGACTCGAACCCTCGTGTCACTGTCTCTGGTGTTGGGTCACGAGCAGGCCAGAGGACCTCATGATCCAGTTATTATCTTTCTAATCTCCTGTCCCTCGGATTGCTTTAAGGCGGAGCTGCAAGGCCTGATGGGGAGTCAAGAGATGCTTCTCCATGACACCCCAGGAACGCGAAGGAAAGTTAAACCACCTCTGGGGCTGAGTGCAGTTGTCATCCCCCACCAAGCTCATACCACCGCCTCGGAAACCGCACCGCAGGGATCTCTGTCCATCAAACACATTCTGCGCAGCTTCTCCAACCGGCGCGCCGCGGCAGCCGGCACAGCTGTTTACCCGATGTGCGTTTTCTCCATTCTGCACGACACACAGGTTTCCCGACACCAATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014223 True 477 mRNA 0.57 5 5607773 5643489

Neighbor

gene id symbol gene type direction distance location
AMCG00014222 NA coding upstream 19 5595455 ~ 5607754 (+)
AMCG00014221 prkx coding upstream 57675 5508024 ~ 5550098 (+)
AMCG00014219 NA coding upstream 477128 5129171 ~ 5130645 (+)
AMCG00014220 nlgn4,nlgn4x coding upstream 489621 5114650 ~ 5118152 (+)
AMCG00014218 NA coding upstream 527990 5079509 ~ 5079783 (+)
AMCG00014225 NA coding downstream 78408 5721897 ~ 5739921 (+)
AMCG00014224 NA coding downstream 112040 5755529 ~ 5774761 (+)
AMCG00014229 sept10,LOC105911973,LOC107697805,LOC108430022,LOC103039444 coding downstream 223416 5866905 ~ 5879257 (+)
AMCG00014237 NA coding downstream 389948 6033437 ~ 6054435 (+)
AMCG00014243 NA coding downstream 591314 6234803 ~ 6239921 (+)
G68538 NA non-coding upstream 156252 5451288 ~ 5451521 (+)
G68509 NA non-coding upstream 750543 4857029 ~ 4857230 (+)
G68497 NA non-coding upstream 822172 4785326 ~ 4785601 (+)
G68473 NA non-coding upstream 959560 4647710 ~ 4648213 (+)
G68434 NA non-coding upstream 1019345 4584474 ~ 4588428 (+)
G68559 NA non-coding downstream 13761 5657250 ~ 5704009 (+)
G68589 NA non-coding downstream 135889 5779378 ~ 5782386 (+)
G68623 NA non-coding downstream 253581 5897070 ~ 5956185 (+)
G68635 NA non-coding downstream 369193 6012682 ~ 6013059 (+)
G68637 NA non-coding downstream 411046 6054535 ~ 6056347 (+)
G68475 NA other upstream 955809 4649200 ~ 4651964 (+)
AMCG00014196 NA other upstream 1476055 4127476 ~ 4131718 (+)
AMCG00014146 NA other upstream 2897444 2706840 ~ 2710329 (+)
G67896 NA other upstream 3477628 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 3705086 1900220 ~ 1902687 (+)
G68830 NA other downstream 1702706 7346195 ~ 7349467 (+)
G68848 NA other downstream 1770151 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 1821014 7464503 ~ 7482560 (+)
G69406 tgfbrap1,LOC102780916 other downstream 4359569 10003058 ~ 10008648 (+)
AMCG00014345 NA other downstream 4504490 10147979 ~ 10151913 (+)

Expression


Co-expression Network