AMCG00014253


Basic Information

Item Value
gene id AMCG00014253
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 6731624 ~ 6732517 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014253
ATGAAGGACCGTCTGGAGGAGCTCCGCCAGAGGACGAAGGAGGCGGAGGCGCAGGCGCGGGCGGGCCAGGGCGAGGACCCGCTCTCCGAGGACGTGGGGGGCGGCGCGGGGCTGTTCAGCCCCCAGGCCGTGATGTTCGAGGCGGTGCCGGTGCTGGAGAACTTCCTGAGCGACGCGCAACGCGTGCGTGACGACATCGGTGACCTGGCGGAGGAGGTCAAGCTCTTCAGCCAGCAGCAGAAGAACCTGGTGGCCACCATGCGGCGCTTCAGTGTCATGAAGAAGGAGAGCAGCATCACGCGGGACATCAAGCTGCAGGCCGAGAGCATCCACCGCCGGCTGGACGCCCTGGCCAAGCAGGTGAAGAGCGCGGAGGCCGAGCATGGCGTCAACGCGGCCGTCGCCCGCATCCAGGGCGCGCAGCACGCGGCGCTCTTCCGCCAGTTCCAGCGGGTGATCCGGCAGTACAACGACACACTGCTCACCAAGCAGGACAAGTGCAAGCAGTTCATCGTGCGCCAGCTGGAGGTAGCCGGCAAGGACGTGTCTGAGGAAGACGTGGAGGACATGATGGCGCAGGGCAAGTGGGAGGTGTTCAACGAGAACGTGCTGCATGACGTGAAGGTCACGCGGACGCAGCTGTCCGAGATCGAGCAGCGGCACAAGGAGCTCATGAGCCTGGAGAGCAACATGAAGGACCTTCGCGACCTCTTCCTGGAGATCTACATGGTGGCGGAGGAGCAGGGCCAGGCCATCGAGAACATCGAGTGCAACCTGCAGAAGACGCAGGACTTCGTGCAGGTGTCCAATGAGAAATTCAAGATGGCCGCCCGATACCAGAAGAAGCACCCTCTCAGACAGatatgctgctgctgctgcccctgcTGTAACTAG

Function

GO: NA

KEGG:

id description
K08487 STX11; syntaxin 11

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014253 True 894 mRNA 0.64 1 6731624 6732517

Neighbor

gene id symbol gene type direction distance location
AMCG00014243 NA coding upstream 491703 6234803 ~ 6239921 (+)
AMCG00014237 NA coding upstream 677189 6033437 ~ 6054435 (+)
AMCG00014229 sept10,LOC105911973,LOC107697805,LOC108430022,LOC103039444 coding upstream 852367 5866905 ~ 5879257 (+)
AMCG00014224 NA coding upstream 956863 5755529 ~ 5774761 (+)
AMCG00014225 NA coding upstream 991703 5721897 ~ 5739921 (+)
AMCG00014259 NA coding downstream 307237 7039754 ~ 7046875 (+)
AMCG00014260 LOC107688668 coding downstream 317819 7050336 ~ 7054907 (+)
AMCG00014261 NA coding downstream 340807 7073324 ~ 7073602 (+)
AMCG00014267 pou1f1,LOC107688653,LOC107551978,LOC107661330 coding downstream 496556 7229073 ~ 7237562 (+)
AMCG00014266 NA coding downstream 545605 7278122 ~ 7285235 (+)
G68728 NA non-coding upstream 16803 6713171 ~ 6714821 (+)
G68698 NA non-coding upstream 484575 6244902 ~ 6247049 (+)
G68686 LOC106586545,LOC106582186 non-coding upstream 525048 6204178 ~ 6206576 (+)
G68665 NA non-coding upstream 616660 6112656 ~ 6114964 (+)
G68649 NA non-coding upstream 621318 6073717 ~ 6110306 (+)
G68738 NA non-coding downstream 11346 6743863 ~ 6744111 (+)
G68771 NA non-coding downstream 324190 7056707 ~ 7058319 (+)
G68904 NA non-coding downstream 893471 7625988 ~ 7626404 (+)
G68982 NA non-coding downstream 1142010 7874527 ~ 7874742 (+)
G69006 NA non-coding downstream 1282227 8014744 ~ 8015003 (+)
G68475 NA other upstream 2079660 4649200 ~ 4651964 (+)
AMCG00014196 NA other upstream 2599906 4127476 ~ 4131718 (+)
AMCG00014146 NA other upstream 4021295 2706840 ~ 2710329 (+)
G67896 NA other upstream 4601479 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 4828937 1900220 ~ 1902687 (+)
G68830 NA other downstream 613678 7346195 ~ 7349467 (+)
G68848 NA other downstream 681123 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 731986 7464503 ~ 7482560 (+)
G69406 tgfbrap1,LOC102780916 other downstream 3270541 10003058 ~ 10008648 (+)
AMCG00014345 NA other downstream 3415462 10147979 ~ 10151913 (+)

Expression


Co-expression Network