AMCG00014262


Basic Information

Item Value
gene id AMCG00014262
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 7062062 ~ 7070724 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014262
GGGGGCGGAGCAGGAAGCGCTCTTCGCTGGGGCTCTGTGTGGCCGAGCTACGCGCAGGCTGAGACGAGCGGCATGGCGGAAGAGGAGAGCGATGTGGAGGCAGAGAGACTCCGAGAGGAGCTGGGCGGCCTGGCAGACAACGGCCTGAGCGTCGGGGTGGGCCTGCACAGCAAGCACTACTGCGCCAGCTTCTGCCGGGTGGTTGAGGAACACACCGGGAGATGGCAGGTGCCGCTTCCCCAGCTGCAGGTGCTCCGGATGGCTCTGTGCTACTTCACCAAGGGGACGGCGTCCTTCTCCGCGGACTGCGAGCACGTGCAGTACGCCCTGAGCAGCCTGGCCCTGAGCTTTTttgagctgctgctgttttttggGAAGGATGAATTCCTGGAGGATCCTTTGAAGGACATTCTTGACTCCTTTCAGGAATGCCATCTGTGCTTGGCGAGACACAAGAATGTCTACCTTATTCTAGTGAAGCAGATTGTCAAAGAAGGTGGCCCCTGGGAGAACCCGGTCCTGCAGGGCATCCTGAAAGAGGCACCACAACCTCAGGACAAAGTGGACAAGTACTTGAGCTCTGAGCTGCCCGCCTTCTTCGAGTTCCGGGTGCGCTACCTGCTGGCCTGCGAGCGGATCCAGGAGGCGGTGACCCTGTCCAAGTGCTGCATGCGCCACGCCGAGGTGGGGCGACACCTGTACTTCCACCAGGCCTACCTGACCTGCCTCCTGAAGGCGTCTCTGTACGACCACCTGCACCGAGAGATGGCCGAGATTGATGGGACGGATGCCGTGGAGATAATCTGCAACACGGAGAGCGAGGAGAGAGACGACTTCCTCCTGGCGCTATGCAAGGCGTTCTTGGTCCAGCAGCTGCAGAGCGGAGATATGTGCTGTATCTGGGACCTGATCTTCATCTGGAGCCGGCTGCAGTTGCGCGCTAACCCCTCCAGACAGGACTTCTTAGAGGAGTGCCAGCAGCTGATACTAACAGTCACCAACGTCAAGATGATTTTCCCATTCATGAAGGTCATTAAGACAGAACTGGGCCCCGAGGGTCTGCAGTTCTGTGTGGAGCTGTGCGCCTGTGCCCTCCAGATGGACCTGCACCACGACCCCGTCACCAAGGCCCTGGTCTACAAGGTCATCGCCTACCTCCTGCCCAACGACCTGGAGGTGTGCCGGGCCTGCGCCCTCCTCGTGTTCTTCCTGGAGCGCACCCTGGAGTCCTACAAGGCCGTGTATCTCCTCTACACCCACCCCGACCAGGAGTACCATGTGGACTCGAGCCTGATCAGGAACCACATCCGCTTCGAGCTGCTGCAGATCCTGAAGAAAGGCTTGTTCTTTGACCCGGAGTTCTGGAATCTGATCACGCTCAAGACCAACTGCCTCTCCTTGATGAGCGACAAAGTGAAGAGAGCGGCGCTGAAGGAGACCGAGGACAAGTGGATGCCAAACGCCTTGGTGAGGGAGACCACCAGGGTGTCCTCAGACCTCCCGGACAGCCCCGCCGAGCCACTGAAGTCCACGGGTGCGGACTGGAGCACGCCCCCGTCTCAGCGCTGCGTCCGGCCGCCTGAGGCAAGCAAGGAGGTGCCGGTGAAGAGGCGGGGGAGGAAGCCCGGTAAGCGCAGCAAGGTGATCGACAAGTCGGCTCTGCGGCGGTCCCTGCGCCAGCTAGACATGGTGCAGGAGAACACCAACAAGCAGCTGGACACCCGGCAGCAGCGGCATCTCGTCCGGCAGACCGAGGGGAAGACGCACAAACTCCACGTGCGGAAGCCCGACTGGTTTCTGCCGGAGAGCACCCATCTGGTGGAGAACAGCGCCCCAAGGAAACGCGTGGGACGGCCGAGGAAGAAGATGCAGCCGTGCCTGCCGGACGTGAAACTGCCTGAGCTCCCCACGGCAGAGCCGGACAAAGCACAAGACCTCCCCCTGGAGGAACCAAAATCGGATTCTTCCTCCCGTGCCCTGACTCGACCACCACCTGTGCTCGTGGAGCCGGTCCCTTCTCCGGAGCAGGCCTCCCCTCTACAAGCCATCCCTCTCCCGTACCACCCTCTCCGGCCCCCTGTCCCAGAGCCAGTGGTAGAAGCGCCCGTCCTGGTGGAAGAGCCTGTGGAGATGCCAGAGGTGGTTGCACCGCTGGAGCCACTCGCGGCTCTCGGAGACGCTGCCACCCCACCTGGCACTCCTGCCGAGGATGGTCCTGCCGAGGACGCTCCTGCTGTACCGGCTTGGGGGGAGTCAGAGATTGCCACCGGGCCGACCGAGGACTTGGCGAAGGAGGGAGACTCTGTCCTCGCACCGGAGGCGACCAAACAGCCGGATGCCGAGCAGCAGCCGGATGCGGTGGGCGGCGACACAACCACGGCAAAGCCGGACAGCCTACCCAGCGGACCGGTGGAGTCGGCCGTGTTCACGGACAGCATCCAGTCCCCCGTCAAGGCACCGGAAGAGAACGCGGAGTTGCCGCCGGCACAGCAGGACCAGATACCCGAGTGCACGGTGCTTGAGCCACAGGGGCTCACCGACAAGCTGCCAGAGGGGCCCGTGGTGGCGCGGGACAAGTCCCCCCAGGGTCTGGTCATCGAGCTGGACACGGCCCTTGAGGCCCACGTGGCCGAACTGGACTGTACGCCTGAGGCCACCGTGGTAGAGCCGGGGGGAGTAACACGACAGACCCTGCGGATAGAGGAGACGGGGGGCATCGCGGTAGAGGCCAGTAAACCAGACAGTGCCGTGAAAGAGGCTGCTGCCCCCCCGGAGCAAGAGCAAGCACAGCAGCCGCAGCCACATCCGGCGCCGAACGAGATCGCCGCCTCCGAAACGCCCGCCAAGAGGCACTTGCGTAACACCCTAGCTCGGACCGAGAACGCCCTGGCCAAGCTGCGCTGCGTGCTGTGCAACAAGGACTGCACCAGCGGCCACATCATGCGGCACGCCACGGTGCACATGCAGAAGGGTGACCTCTCCTGTGTGCTGTGCGGCAAAAAGTTCAAGAACCAGAGACTGACGCTCAACCACCTGAAGGAACACATAAagaaattgaaaaggaaaaacaacacgCCGGCCGTCCGGGAAAATGACCGCAGCGCTCCCACTGAGAACGGCACTGCGGAGACTCCCAGGCACAACGCTGAGCCGCCGCCTGCACCCCCCAATCACGAGCAGGTGGCGCCGGAGAACCACATAGAGAACCACGCCAGCGGTCCTGCACCTCCGGACAGGCTGAGTGCCACACCGAAAGCCTTGGAGAAGCAGGAGAGAAACAAACCCTCGAAGAAGGATCCGTCCATAGTCCAGAGGGCGAACGGGTCGGTGTCCAAGCCGAGCCCGCAGAGGGAGTTCGGCTGCCCGGCGGAGAGCTGCACCCGGGCCTTCGTCCGAGAGTGGGCTCTGGTCAAGCACGTGAAGGCGGCCCACCCCAGCGACCTGCGGGTCCAGGAGTTCGTCTTTGCCCGGATCAAAGGGAGGTGCCTGTATTGCCAAAGAAGATTCCAGAGTTTCCAGCACTACCTAGATCACGTCAAGAGACACGACGACGCGCTGAAGTACTTCTGCTGCCACTACAACTGCGCCGGCCGGTTCAAGACCCACGCTGAGCTGGCGCAGCACACCAAGAGCCACCCGCAGTTTCAGGCGCAGTGCAGCTCCCCTGACTGCTTCGCGCTCTTCACCGACATGTCCATCCTGCACGATCACGAGTGTTTGCATTATCCTCCGACGGTCACCACCATGGCAGACGCATCAGCGCACCTGACCTCGGTGGGTGGCGGCCCGGCGAAGAGGAAACGGAAGAAAGACGCCCCCGAGCAGACCCCCGTCTCGGCCTTGAAAATCAGAAGGAAGAAATCTGCTGAGACGAAGACGTACACGCCGGGCGTGGGGGGGAAAGCGAGCGAGAAGGAGACCGGGGATGGCGCCCCCGAGGTTGGGAGTGTGGGACAGGCAGTCGGCGCTTCCGGGGACGGCAGTGTTTCAGACGGGCAGCTATTAAACGGACACACTGAAGTGGAGGAAGGGGGAGAGGGCACGGCCGGGTCGACCAAAGCGGCAGCGGCAGAGGCCTCCGAGCCCCAGGTGGCTGCAGCAGATGGACCGGCAAAGGAGCTGGACACTGGAGACGCTAGAGACACGGCAGCAGATAAGGCGGCCAAGGACCAGCCGGACAAGGCGCCTGCCGGCACCGAGGGCGCCCTCCTGACGCCCAAGAAGAGCAGGAAGCTCCCGGACGAGCTCTCCCCGTATGGCGGCACCTCCAAGAAACCCTTCGTCCGCCCGCCGCCCTCGGCCTACCTGGACGAGCAGTACATCAGCATGCCCAAGCGCAGGAAATCGCCCGCCAAGACGGACTCCCCGGTGCCGCACCAGGCAGAGCCGAGCACCGGCGGCCCGAGGCGCTGCACCAAGTGCTTCGTGCTCTTCAGCAAGGTGGAGGAATTGCAGAGCCACCTGGCGCAGAAGAAGTGTCAGGCGCTCTTCGGCTTTGACTCCGATGAAGAAAGACTGAAGATGCCCCTGTGCCCGGGCGGCCGGGGCTCGACCGCGGCTCGACCGCTTCGACCGGCCTGGATCGCAGGGCTACCTCAGAGCACTTTTTACCGGACCCCCGCCGCCGAGGGGCTCGAGAGGCGTGTCCGAGACGCAGGCGTGCACTGGGGGGGCCTCGACCAACACGCTTAA

Function

GO: NA

KEGG:

id description
ko00310 Lysine degradation

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014262 True 4692 mRNA 0.63 9 7062062 7070724

Neighbor

gene id symbol gene type direction distance location
AMCG00014264 NA coding downstream 84 7061721 ~ 7061978 (-)
AMCG00014263 NA coding downstream 19346 7040731 ~ 7042716 (-)
AMCG00014258 epha3 coding downstream 173972 6887026 ~ 6888090 (-)
AMCG00014257 epha3,LOC107549902,LOC107676997 coding downstream 201520 6814181 ~ 6860542 (-)
AMCG00014256 NA coding downstream 306429 6752859 ~ 6755633 (-)
AMCG00014265 NA coding upstream 6315 7077039 ~ 7093313 (-)
AMCG00014268 chmp2b,LOC108435168 coding upstream 169560 7240284 ~ 7254356 (-)
AMCG00014269 LOC108441420,LOC107582737,LOC107726519,LOC106592197 coding upstream 276728 7347452 ~ 7365740 (-)
AMCG00014270 LOC102779158 coding upstream 296670 7367394 ~ 7376923 (-)
AMCG00014277 NA coding upstream 316894 7387618 ~ 7397769 (-)
G68774 NA non-coding downstream 3743 7054777 ~ 7058319 (-)
G68773 glrx,LOC100698576,LOC103359009,LOC108424411,LOC103461279 non-coding downstream 7756 7053931 ~ 7054306 (-)
G68767 NA non-coding downstream 16250 7044125 ~ 7045812 (-)
G68757 NA non-coding downstream 71195 6990603 ~ 6990867 (-)
G68724 NA non-coding downstream 381774 6680025 ~ 6680288 (-)
G68826 NA non-coding upstream 217339 7288063 ~ 7288335 (-)
G68827 NA non-coding upstream 218212 7288936 ~ 7289437 (-)
G68829 NA non-coding upstream 269627 7340351 ~ 7340555 (-)
G68867 NA non-coding upstream 369776 7440500 ~ 7441172 (-)
G68874 NA non-coding upstream 385254 7455978 ~ 7459889 (-)
AMCG00014241 NA other downstream 953704 6059489 ~ 6108358 (-)
AMCG00014228 NA other downstream 1383563 5659072 ~ 5678499 (-)
AMCG00014181 ppef1,LOC105893339,LOC108425737,LOC107695075 other downstream 3667308 3385757 ~ 3394754 (-)
G68088 NA other downstream 4232918 2825562 ~ 2829144 (-)
AMCG00014144 NA other downstream 4408815 2641059 ~ 2653247 (-)
AMCG00014271 NA other upstream 307364 7378088 ~ 7386984 (-)
AMCG00014276 LOC106575771,LOC106574874,LOC107705522,LOC107584803,LOC105911816,LOC105019730 other upstream 331428 7402152 ~ 7411890 (-)
AMCG00014278 NA other upstream 343005 7413729 ~ 7423291 (-)
AMCG00014297 NA other upstream 1064179 8134903 ~ 8139126 (-)
AMCG00014298 NA other upstream 1085208 8155932 ~ 8158590 (-)

Expression


Co-expression Network