AMCG00014273 (tomm70)


Basic Information

Item Value
gene id AMCG00014273
gene name tomm70
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 7445016 ~ 7455956 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014273
GTGCACAAACAGGAAGTCCCAAGCGCGACTGACCCGGATGCGGTTGCTGCACCGCCACTAGTGTCCCATGATGCACCCGGCTCCTCCCTGACCTCGCCGTGTCTGTGTCGGCAGTGCAGTTGCGTGCTCGTCGGTTGTTGCTTGTTAGATGATGGCGGCCTCAAAGCCTGTGGAGCCGCAGACCGGCGGCGGGCTACCCCGCTGGCAGCTCGCCCTCCTGGTGGGCACCCCCCTGGTGTTGGGGGCCGGCGCCGTGTACCTGTGGAACCGCAGCCGGAGGAAGGAGAACCAAGGCAAGCGCAACGGCGAGAGGAAAACCCCCGAAGGCAGCGCTAGCCCCGTCCCGGGCCAGCCGCAGCAGGACGGCGCCGCGAACCGAGCCGGCCGAGAGCAGGAGGAAATGagtCCTCTGGACCGGGCCCAGGGAGCCAAGAACAAGGGCAACAAGTACTTCAAGGCTGGCAAGTATGAGCAGGCCATCCATTGCTACACCGAGGCCATCGGCCTGTGTCCCAAAGAGCAGAAGGGAGACCTGTCCACCTTCTACCAGAACCGAGCCGCGGCCTACGAGCAGCAGatgAAGTGGGCCGAGGTGGTGCAGGATTGCTCCCGGGCCGTGGAGCTGAACCCGCGCTACGTCAAGGCCCTGTTCCGCCGGGCCAAGGCCCAGGAGAGGCTGGACAACAAGAAGGAGTGTCTGGAAGATGTGACAGCGGTGTGCATTCTAGAAGCCTTCCAGAACCAGCAGAGCATGCTGCTGGCAGACAAGGTGCTCAAGCTGCTGGGCAAGGAGAAGGCAAAGGAGAAATACAAGAACCGTGAGCCCCTAATGCCGTCGCCACAGTTCATCAAGTCCTACTTCAGCTCCTTCACGGACGACATCATCTCACAGCCGCTGCAGAAGGGTGAGAAGAAGGACGAGGACAAGGACAAGGAGGGGGAGGCCGCTGAGGTCACTGAGAGCTCCGGGTACCTGAAGGCCAAGCAGTACATGGAGGAGGAGAACTACGACAAGATCATCAGCGAGTGCAGCAAGGAACTGCGGGCGAATGCTCTGATCAAGCGGGGCAGTATGTacatgcagcagcagcagccccagctGTCCACACAGGACTTCAACCTGGCAGCTGAGATCGACCCACACAATGCCGACGTCTACCACCACCGCGGACAGCTGAAGATCCTGCTGGACCAGGTGGAGGAGGCGGTGGGCGACTTTGACGAGTGTATCCGGCTGCGTCCCGACTCCGCGCTGGCCCAGGCCCAGAAGTGCTTTGCCCTGTACCGACAGGCCTACACCGGGAACAACCCCTCCCAGGTGCAGACCGCCATGTCTGGCTTCGAGGACGTCATCCGCCGATTCCCCAAGTGCGCTGAGGGCTACGCTCTGTACGCACAGGCTCTGACAGACCAGCAGCAGTTTGGGAAGGCTGATGAAATGTACGACAAGTGCATTGACCTGGAGCCGGACAATGCTACCACATACGTACACAAAGGGCTGCTACAGCTGCAGTGGAAGCAGGACCTGGACAAAGGCCTGGAGCTCATCAGCAAGGCCATCGAGATCGACAACAAGTGCGACTTCGCCTACGAGACCATGGGCACCATCGAGGTGCAGAGGGGTAACCTGGACAAGGCCATCGACATGTTCAACAAGGCCATCAACCTGGCCAAGTCGGAGATGGAGATGGCCCACCTGTACTCCCTGTGCGACGCCGCTTACGCCCAGACGGAGGTGGCCAAGAAATACGGGCTGAAGCCCCCGacactgtaacccctccccacCCACCCTCCAACCAC

Function

symbol description
tomm70 Predicted to enable mitochondrion targeting sequence binding activity. Predicted to contribute to protein transmembrane transporter activity. Involved in several processes, including cellular response to virus; positive regulation of interferon-beta production; and regulation of defense response. Located in mitochondrion. Biomarker of congestive heart failure.

NR:

description
PREDICTED: mitochondrial import receptor subunit TOM70

GO: NA

KEGG:

id description
K17768 TOM70; mitochondrial import receptor subunit TOM70

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014273 True 1800 mRNA 0.61 12 7445016 7455956

Neighbor

gene id symbol gene type direction distance location
AMCG00014266 NA coding upstream 159781 7278122 ~ 7285235 (+)
AMCG00014267 pou1f1,LOC107688653,LOC107551978,LOC107661330 coding upstream 207454 7229073 ~ 7237562 (+)
AMCG00014261 NA coding upstream 371414 7073324 ~ 7073602 (+)
AMCG00014260 LOC107688668 coding upstream 390109 7050336 ~ 7054907 (+)
AMCG00014259 NA coding upstream 398141 7039754 ~ 7046875 (+)
AMCG00014274 nit2 coding downstream 28106 7484062 ~ 7489351 (+)
AMCG00014281 lancl3 coding downstream 181865 7637821 ~ 7642535 (+)
AMCG00014282 xk coding downstream 189462 7645418 ~ 7653546 (+)
AMCG00014283 NA coding downstream 203512 7659468 ~ 7664529 (+)
AMCG00014285 NA coding downstream 257433 7713389 ~ 7729891 (+)
G68771 NA non-coding upstream 386697 7056707 ~ 7058319 (+)
G68738 NA non-coding upstream 700905 6743863 ~ 6744111 (+)
G68728 NA non-coding upstream 730195 6713171 ~ 6714821 (+)
G68698 NA non-coding upstream 1197967 6244902 ~ 6247049 (+)
G68686 LOC106586545,LOC106582186 non-coding upstream 1238440 6204178 ~ 6206576 (+)
G68904 NA non-coding downstream 170032 7625988 ~ 7626404 (+)
G68982 NA non-coding downstream 418571 7874527 ~ 7874742 (+)
G69006 NA non-coding downstream 558788 8014744 ~ 8015003 (+)
G69023 NA non-coding downstream 677332 8133288 ~ 8136210 (+)
G69206 NA non-coding downstream 1278367 8734323 ~ 8735939 (+)
G68848 NA other upstream 28422 7413640 ~ 7416594 (+)
G68830 NA other upstream 95549 7346195 ~ 7349467 (+)
G68475 NA other upstream 2793052 4649200 ~ 4651964 (+)
AMCG00014196 NA other upstream 3313298 4127476 ~ 4131718 (+)
AMCG00014146 NA other upstream 4734687 2706840 ~ 2710329 (+)
AMCG00014272 tbc1d23 other downstream 8547 7464503 ~ 7482560 (+)
G69406 tgfbrap1,LOC102780916 other downstream 2547102 10003058 ~ 10008648 (+)
AMCG00014345 NA other downstream 2692023 10147979 ~ 10151913 (+)
AMCG00014407 LOC107725344 other downstream 5790353 13246309 ~ 13251732 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 6199282 13655238 ~ 13689188 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_032896 tomm70a coding NC_007117.7 CM002890.2 28946041 ~ 28961660 (-)
grasscarp (Ctenopharyngodon idella) CI01000340_03342324_03363204 TOMM70, TOMM70A coding CI01000340 null 3342301 ~ 3363619 (-)