AMCG00014284


Basic Information

Item Value
gene id AMCG00014284
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 7668553 ~ 7675258 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014284
GGTGGCATGTAGACCTCTTACCGCTAGGGGGCGATCACCAGATCCGCTCCCCTTGCCGGCGGGGTGGGACTCCCTTGCCCGGCACTCGTCGAGCAGCAGCTCCGGACTGACAGCTGGACAGGAACCTGGCGCTGTGTCACCGACAGCGGCTTGCAGTGGGATCATCTCCGCCCGTGTGCGCGAAACAATGGAGGAGTACCATAACAGCGACGAGGTGTCCTTCAATCCAGATGAAGCAAGTAACTATGTCAAAGAGTGCATCGAAGGCATCATTGGTGGAGTGGATTACAACCAGAACAAAGTGAACCAGTGGACGGCCAGCATCGTGGAGCACTCCCTCACCCAGCTGGTCAAACAGGGGAAACCCTTCAAGTACATTGGCAAGTATCTCTTCATTATCGCTTCATTCTATCCACCCATCACTACGCATCTCAAAAACATCCTCGCATCACGAGGATGCATCACGGCTCCGTGCCCTGAATGGATTCTGAGATGGCGTGGCATGAACTGTGCGGTGATGCAGAAGAGCGGGGCCGGCCTGCACACGGCCAACTCCTGCTACTGGGACACCGCCACTGATGGGAGCTGCACGGTGAGATGGGAGAACCGCACCATGTATTGCGTGGTCAGCGTCTTCGCCGTGGCCGTGGCCCTCTAGCACGCTGACTCTGAACATGAAGAGCGTGAGAGAATAAGGCtggacaaacaaaaaatgcacacagacacgcatTGGGAACCACCAAAGCCTTGAAGATCTAATGCTGGTTATGTGTGTAACTCTCGCACTACGAATTAGCTTGGTAACAATGAACACTTGAGTACGCACACCTTCCACAGTCGCGCATCTAGGCTACACTGCAAGGTTTCCTTTGGCATTTTACACATTGTGGTTAACAGTCATGCTTAGATATGTTACCATTTCcattgttattgtgttgtgaaggcctttattttttttcattttacccTGAggcaaaacaatgcattttgtgATATGGATATTCTTTTATATAACGCTTGGCCTATTTTCTGGTTTCTCCAGTTTAAGCAGCAGTCCCATTGCTCAACAATGTGTATATATCTCTTTAATTCTTTTAGCAAATGCAGCAGAAAGGTGCTTGTTTAAGgccatgctttattttttataacatgGTGGTGCCCTACATGTCTTTAAATCTGGCCTCCATTCGTGCCTGGAAAGAACAAAATGGTTTCAGGGATTTTAACAACAACTGCTTTGTAAAAGAATGAAAGAGACCATCTGCTCTAAATTGTTCTTATTTGCTATCTTACCTCTAAACTGAAGATATCTTTCAAAATGCTGaatgttttctgttctcttGCAAATGCTATTGCTTTTCATGGTGACAGATTAACTGCATTACAATATCTGGTCCCATAGAGATCCAGAACgttaatatttacacattccatatttaatttgttgacaaataataaaatatttacagtttcaCAATGGTTATTAAGTAAACTTTGcttatgtatttttgattttaaacagaagTGTGACTTTGCTGTCTTTTATGATGCCACTAATATACAATTTCCATTTAAACCCCAAACTAAAGCAGTATTCTCATATCTGACCCTGCCAATCGATTGATtgttttagaattgtatttaattatataaagttTGATGTGGTGCACATATTGTTCTGGGCAATGGACACATTCAGCTATGGTTGCCGGAATCCAGTAACTGattgtaatatatttctgaTGTATAAATACAAGTTAACTAGAACtggaactgaaaaaaaacaagaatttgAATTATACTTTCAATTAGTtactttacaatttacacacactttacaacgcccccccaccaccacttgTGAAAGGCCAGGAATTAATCATGAATGACCAGTGTCAGTAATTTGAGTGATGCACTAGCATCATCTAATTCAAGAAGTAACCACTAAATAAACCAAGAGTGGTTCCAatctttttaaacaatgtagAGAATGAGTACTGACACACGCTGTATAAAGCTGAATACATAGAAGTaagaaactaataatttccGAATAAAGCTCATAATGTAAACACCAATTGTTGCATTATAATGACCTTTGATGATGTATTGTAAATACCTCGGTAGAGCATGCCTTGAATATTGGAGATGGACTTCTTAATGTCACTGCAAGCTGTTGTACTGACCTGCCTTCTGTGTTACCGCTCCGACAGTGAGCACACACTTGTGTAAAGACCCGGGTCACACAGTGCCTCTCGTCCCTCTATCCCTGTGCTCCGTCTCGTGCCACAGCTGTGCGGGATGTCTGAGGAAAAGCATGCTTTTGTAACATCTAGAGCCGAGCTGTAAGTAAATAGAATTAACCCACCTGGGCTGGTGTTTCTCATTCATTACACATGCTTAATGAAGACTAGACTTTTGCTAGACGGTTGCTGGAGTAGATGCACTGAGCACAACTCTCAAGTGGACATGCACAACTACAGGGCAGAATAACTcgcatatattttgtaagaagTAAAACACTACTACTAGATATGTTACCATTTACACATAATGACTAGAATTAGAATAATGACCAGATTCCATTAATTCTGAAGCAACACCATTTGTTGTTTAAGACTCACTTcatgactttattttaaatcacagaattTGTACTGATTTGGTCACACTAGTGTATGAATGTGGCAATTTTGTATATCAGTATCCTATATTATTCTGTATCTGCATCAACATCAGTCGATTATTTATGCAAATCTAGTCTGCTTAGATATCGCCTGTGGCTGTAGTACAAACTTCAGATATAGGAATAACTTTCGTTGGGAAGAACACGTATTTAGAAGTCTTCCagacaaaagtgcagtagtttTAAGTTAAGGTTAAAAATACTTATGTCatataaagtttattattatttgaacagGATatgattactttaaaatatgattttcccATTTGGATGTAAACTGAAATAGACAAACGCTTAGTGCATTTGAAACGTGAGATTTGATGGAGACTATTATCTGTATGAGCACCAGGGGGCAGCACTTAAACAGAAAATGGTCAAAAACGGCGCTGCTGTGCATTGAGCGCAGAGACGTCACAATGATTGGATGGGTGTGATGTGACACATTTTGATTGCAATGGCGTGTAGAAGAATGTGATTctttaaaacgaaacaaaacaaaaaactaaaattccCAAATGCACTGATTCTGTATGGCTGTGTGAAAGACTGGCGCCTGACAGTGTCATGTGACATCCTTTGACAGGGGCGTGGCTTGATTATAAtatcatttctttcttttctttttcttttttttttaataataaacccCATTTATCACACACTCGTTTTGATATTATCATGTTATAATTGATACACCTATTAATGCCACACATCTTGCAAATATGTACCACATTAAAGGCGTATGATTGTAATAAATCTGGTTAGCAATGATCTTGCATATATAAATGCTTACCAGTGCTTCTGCTGAGTTAAAACACACTTATGATATGCCTTTATGCATTGATGTGAAGCATAAATGGCTTTTTGTAAACATGGCAAGGATATGTAATTCCCCTGCTTCAATAAAGCTTAagtgatatttaatattgtgg

Function

GO: NA

KEGG:

id description
K10420 DYNLT; dynein light chain Tctex-type 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014284 True 3621 mRNA 0.40 6 7668553 7675258

Neighbor

gene id symbol gene type direction distance location
AMCG00014280 NA coding downstream 88453 7569311 ~ 7580100 (-)
AMCG00014275 NA coding downstream 232447 7426221 ~ 7436106 (-)
AMCG00014279 NA coding downstream 242877 7425128 ~ 7425676 (-)
AMCG00014277 NA coding downstream 270784 7387618 ~ 7397769 (-)
AMCG00014270 LOC102779158 coding downstream 291630 7367394 ~ 7376923 (-)
AMCG00014287 NA coding upstream 55756 7731014 ~ 7751865 (-)
AMCG00014286 NA coding upstream 77648 7752906 ~ 7783002 (-)
AMCG00014291 LOC107586940 coding upstream 345727 8020985 ~ 8060018 (-)
AMCG00014296 NA coding upstream 466931 8142189 ~ 8147008 (-)
AMCG00014295 NA coding upstream 473129 8148387 ~ 8155403 (-)
G68905 NA non-coding downstream 42178 7625985 ~ 7626375 (-)
G68875 NA non-coding downstream 202891 7465409 ~ 7465662 (-)
G68874 NA non-coding downstream 208664 7455978 ~ 7459889 (-)
G68867 NA non-coding downstream 227381 7440500 ~ 7441172 (-)
G68829 NA non-coding downstream 327998 7340351 ~ 7340555 (-)
G68981 NA non-coding upstream 198895 7874153 ~ 7874358 (-)
G69086 NA non-coding upstream 551236 8226494 ~ 8250561 (-)
G69233 NA non-coding upstream 1215298 8890556 ~ 8890839 (-)
G69250 NA non-coding upstream 1323168 8998426 ~ 8998626 (-)
G69352 dcaf6 non-coding upstream 1674530 9349788 ~ 9355238 (-)
AMCG00014278 NA other downstream 245262 7413729 ~ 7423291 (-)
AMCG00014276 LOC106575771,LOC106574874,LOC107705522,LOC107584803,LOC105911816,LOC105019730 other downstream 256663 7402152 ~ 7411890 (-)
AMCG00014271 NA other downstream 281569 7378088 ~ 7386984 (-)
AMCG00014241 NA other downstream 1560195 6059489 ~ 6108358 (-)
AMCG00014228 NA other downstream 1990054 5659072 ~ 5678499 (-)
AMCG00014297 NA other upstream 459645 8134903 ~ 8139126 (-)
AMCG00014298 NA other upstream 480674 8155932 ~ 8158590 (-)
G69156 LOC107673457,LOC105895139,LOC107711008,LOC106521848,LOC107716961,LOC101064050,LOC103356925 other upstream 708027 8383285 ~ 8384224 (-)
AMCG00014328 mpc2,LOC107673680,LOC107695492 other upstream 1629981 9305239 ~ 9317167 (-)
AMCG00014340 NA other upstream 2325876 10001134 ~ 10017751 (-)

Expression


Co-expression Network