AMCG00014287


Basic Information

Item Value
gene id AMCG00014287
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 7731014 ~ 7751865 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014287
CGGAGATGCGTCCCGGCTGTGTGTCCAAATTGGATTAGTAATTGGAGGAGAATATTCTCCCGTTTCCTGCAGCAGGAGGCGGATCCGGTGGAAAGGGGCTCCAGCTGCCTGTTTCTCCCTGAGACTCATGGGGAAGAGAGTGAAACATCTGGACATGGATACCTGGCTGCTAGCGGTCCTGGTCTTAGGTGTGCACTTTTCCTGCAGCTTTGGATACCACGAAGgATCTGGATATTCACCGCATGGAGACGACGAAGACACTTATTCACATAGATATAAAGGGACGCCTTGGTGCGCTCCCATCAAGGTGAAGAATGGCCAGGTGAGCTGCCGGACACCGAGAGGAGAGTACTATAAGAATGTGATGGGGACCCGTTGCAAAATCCACTGCAAGAAGGGCTATGAGATCGTGGGGCACCCGGAGGTCGTCTGCATGGCCAACAAGAGGTGGTCTGGGAATTATGCATGCAGAGAAATCCGCTGCCCCATGCTGACCATGCCAGCGAACGGAGGCTATAAGTGTTCGGACGGGTCCTACTTCAACTCCCGGTGCGAGTTCTTCTGCTCGCCGGGCTACCAGCTCAAAGGAGACACAGCGGTGACGTGCATGAGCAATAAAGCCTGGACTGGGAGGCACACCACTTGTGTGGATATCGAACCCCCTGCCATCCACTGTCCCAGCGTAAAAGACAAGACTGCCGAGCCGGGCAAGCTGACTGTGCGAGTGCACTGGGACACCCCGGAGGGACGGGACACCGCCGACGGCACACTCACAGATGTGATTTTGAAAGGGAAACCGCCAGGATCCAACTTCCCTGCAGGAGACAACAAAATCCAGTACACCGTGTATGACAGAGCCGGCAACAAGGGCACCTGCAAGTTCTCCATCAGAGTGCGAGTTCGTCGGTGTGGCCCACTGAATGCACCGGAGAATGGCTACATGAAGTGCGACAGTGATGGAGATAACTACGGGGCCACCTGCGCGTTCTCCTGCATGGGGGGGTATGAGCTCCAGGGCAGCACCGCCAGGGTCTGTCAGTACGGGATGACATGGTCGGGCAACGAGGCCACATGCGCAGCGATGAACATCAACGTGGGCGTTCGCACCGCGGCCGCCCTGCTGGACCAGTTCTATGAGAAGAGGCGGGTCCTCATTGTGTCGGCTCCCACAGCAGCCAATCACTATTACCGATTCCAGATGGGCATTCTCCAGCAAGCTCAGTGTGGCCTTGATCTGAGACACATCACCGTCATCGAGCTGGTGGGGGTTTACCCAGCTCAGATCGGCAGGATCAGGCACAGACTCATCCCACCTGGCCTTGCCTTACAGATCAGGTTGTTGCTGCAGATCTCCCACAACAGCTACAGCATGGTCTTGATCGACAAGCACGGAACGGACAAGGAGCGCTACGCCTTCCCCGTCACCGCGTCCGAGCTCTTCACCCTCATCGACACCTTCCCCCTGAGGAAGGAGGAACAGAAGCTGCAGCAGGAGTCGGGCCAGTCCTGTCCTTAGTGTGCACTGTCCTGTCCAGTCTTGCCTTTAGTGTCCCCTGTCTTGTCCTGTCCTTAGTGTCCACTCtcctgtccagtccagtccagtcctgcCCTTTGTGTCCCCATTTCCTGTCCTGTCCAGTCCTGCCCTCAGTGCCCTGTCCTGTCCCCACTGACGGGGGCTTCCCTTTCACCTCTTTCAGCCCCCGTCTCGTCTCCAGAGGTGCTACAGAAGAGCATGGCTTTTTATAACACTgatgtacaaatatttttcttgtgttttgtccGTATGCAtgattagtattttttattctttttttattaaagcagccaggattttattttgcatcatttgattttttttctttgttcattttgaGGTGGGGGAAAGTAGTTTAAtctagcaaaaacaaaatggttttatatttatgtttaaaaaaaatattccagtatatttttcattttttttttttttttttattgacacCTTCATGTGTATCAATGCAATGCAGGCTGTTGAGTTGTGTAATTTCTGTTGGTGTATCAGTAAATGTTTtgatctgaaaatatatatttttctgca

Function

GO: NA

KEGG:

id description
K23818 SRPX; sushi repeat-containing protein SRPX

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014287 True 2080 mRNA 0.52 10 7731014 7751865

Neighbor

gene id symbol gene type direction distance location
AMCG00014284 NA coding downstream 55756 7668553 ~ 7675258 (-)
AMCG00014280 NA coding downstream 150914 7569311 ~ 7580100 (-)
AMCG00014275 NA coding downstream 294908 7426221 ~ 7436106 (-)
AMCG00014279 NA coding downstream 305338 7425128 ~ 7425676 (-)
AMCG00014277 NA coding downstream 333245 7387618 ~ 7397769 (-)
AMCG00014286 NA coding upstream 1041 7752906 ~ 7783002 (-)
AMCG00014291 LOC107586940 coding upstream 269120 8020985 ~ 8060018 (-)
AMCG00014296 NA coding upstream 390324 8142189 ~ 8147008 (-)
AMCG00014295 NA coding upstream 396522 8148387 ~ 8155403 (-)
AMCG00014300 LOC107585190 coding upstream 414377 8166242 ~ 8186240 (-)
G68905 NA non-coding downstream 104639 7625985 ~ 7626375 (-)
G68875 NA non-coding downstream 265352 7465409 ~ 7465662 (-)
G68874 NA non-coding downstream 271125 7455978 ~ 7459889 (-)
G68867 NA non-coding downstream 289842 7440500 ~ 7441172 (-)
G68829 NA non-coding downstream 390459 7340351 ~ 7340555 (-)
G68981 NA non-coding upstream 122288 7874153 ~ 7874358 (-)
G69086 NA non-coding upstream 474629 8226494 ~ 8250561 (-)
G69233 NA non-coding upstream 1138691 8890556 ~ 8890839 (-)
G69250 NA non-coding upstream 1246561 8998426 ~ 8998626 (-)
G69352 dcaf6 non-coding upstream 1597923 9349788 ~ 9355238 (-)
AMCG00014278 NA other downstream 307723 7413729 ~ 7423291 (-)
AMCG00014276 LOC106575771,LOC106574874,LOC107705522,LOC107584803,LOC105911816,LOC105019730 other downstream 319124 7402152 ~ 7411890 (-)
AMCG00014271 NA other downstream 344030 7378088 ~ 7386984 (-)
AMCG00014241 NA other downstream 1622656 6059489 ~ 6108358 (-)
AMCG00014228 NA other downstream 2052515 5659072 ~ 5678499 (-)
AMCG00014297 NA other upstream 383038 8134903 ~ 8139126 (-)
AMCG00014298 NA other upstream 404067 8155932 ~ 8158590 (-)
G69156 LOC107673457,LOC105895139,LOC107711008,LOC106521848,LOC107716961,LOC101064050,LOC103356925 other upstream 631420 8383285 ~ 8384224 (-)
AMCG00014328 mpc2,LOC107673680,LOC107695492 other upstream 1553374 9305239 ~ 9317167 (-)
AMCG00014340 NA other upstream 2249269 10001134 ~ 10017751 (-)

Expression


Co-expression Network