AMCG00014290


Basic Information

Item Value
gene id AMCG00014290
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 8000090 ~ 8003278 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014290
TGCCACAGCCCGGCCTGGCCGCTGGATTATTTTTCAGAGCTCGTAAAAAGAAGCAGCACGGCCTCCCGTGACAAAGGGATTAATAGGGGGTCTGGGGAGATTGGCGTCAGCTGTGGGAATTAGCCAGGACCTGGTGCATTACAGGTTAAAAGACAACAACTGGCAGCGACGGCGCGGCGGGGAGAGCATTTTAGATTGAAGCCCACCGCCGGCCACATGTGAAAGACGGCTCCgaggggctgggctgggctgccGCCTCGTAAACTTCCTCTTAAACAACAGGAACTGCTCGTTAGCGAGGGGGAGGCAGAGCCGCGGCCTGTGATGGGAGCCGGGCTGGCGGGCAGCAGTGCGCACGACTCCGGGCCGCGGCGCTGCTCGCATCAGGTCGCTGTCACGCTTTGTGGCCGCACTGCTCGACAGAGGAAGCCCAGACAACCTTATCGGCAGGCAGGCGGACGGCTGGCTGACACGGCGCCCCGGCCCCGGCCCTCGGTGTCCGCAGGATGGAGGGCTCTCCGACTCTGCGGCTGGGGACGCCTGCGCGCCGCTTCAAGTGATAAATGCGCCCTAACCGTGCGGAAGAAAGAGAGGGGTCAAGTGACAAGGTCAGGGGTGAGGCCCAGCATACATCCCGTGAAGGCAGCGCTGGGGACGGCCTGTTTCCGAGTCATCATCTGACTCTGCGGgcccaaacaaaacaacaagccCAAAATACCAGCTGACCTCATTTCCCGTGCAGGCCGTGCATGTGGCGGCTTCTTGGAGCTCTGCACTCTCCTCAGAGACAGACTTCACACATGTGCTCAAAACCAGACCGAGAGCTGCGCTGGGAAATCTGTTGGGGCAGCTTAACTGTCCTCATTTCTCTGACTTTGTCCCTGTAGCTGGAGGTCAAGGGTGCACAGGGTGGGTTTCAGAAAACCTTCTGCAAAAGGCCGCTGCTCCTGTATCTTCTAAAAAGGACGGGACAGGGTGGTGTTTAAGGTTATAAGGACTGGAATCACACTgagcatttcctgtttttttttttccactctctagaaaaatgttgttttctgacAAACACTAGGAACCCGtgtacatatttacaatttgaGACCATTTACCAACAGCCGCGCtggctctctgtgtgtttgtgttgacaGGGAATTAACCATGTCTCTGAAATCACCGCCCTTGTGAAACCTTGGTAAATCGAGTTGCTTTCAGTTGAGGGAAAAACAGTGTGCGTTAGACCATCCTGAATTACACGTATATCTATTTTTGAAGTTCACTTATTGTTTCATCTTCACCCGCATTAGTGAAAGCCTCTCTGACTTCTCATAAACCAGACAGGCAGCTTCAGGACTCCGTGGAAACGTCCTGTGTCTTAACTCAAACTTTAATTAGGAGTGTAAATTAAATCAACCTTTTGTTGATCTTAAAGAGATCTCTCATATTTCTGAATAAAGAAGAGAGGGTAATTcaaaggtgttttttctttgttttattagcaGGAAACGGGGATTTTTAATGCCGATGGGAACCCGGTTTGTCTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014290 True 1542 mRNA 0.52 4 8000090 8003278

Neighbor

gene id symbol gene type direction distance location
AMCG00014289 tspan7,tspan7b,LOC107704418,LOC107745974,LOC107593043,LOC107586946 coding upstream 144739 7845556 ~ 7855351 (+)
AMCG00014288 NA coding upstream 204708 7783729 ~ 7795382 (+)
AMCG00014285 NA coding upstream 270199 7713389 ~ 7729891 (+)
AMCG00014283 NA coding upstream 335561 7659468 ~ 7664529 (+)
AMCG00014282 xk coding upstream 346544 7645418 ~ 7653546 (+)
AMCG00014292 NA coding downstream 117097 8120375 ~ 8127095 (+)
AMCG00014294 NA coding downstream 124926 8128204 ~ 8131793 (+)
AMCG00014293 NA coding downstream 157130 8160408 ~ 8161280 (+)
AMCG00014299 slc9a7,LOC107673530 coding downstream 201544 8204822 ~ 8250935 (+)
AMCG00014306 cyfip1 coding downstream 260158 8263436 ~ 8321739 (+)
G68982 NA non-coding upstream 125348 7874527 ~ 7874742 (+)
G68904 NA non-coding upstream 373686 7625988 ~ 7626404 (+)
G68771 NA non-coding upstream 941771 7056707 ~ 7058319 (+)
G68738 NA non-coding upstream 1255979 6743863 ~ 6744111 (+)
G68728 NA non-coding upstream 1285269 6713171 ~ 6714821 (+)
G69006 NA non-coding downstream 11466 8014744 ~ 8015003 (+)
G69023 NA non-coding downstream 130010 8133288 ~ 8136210 (+)
G69206 NA non-coding downstream 731045 8734323 ~ 8735939 (+)
G69232 NA non-coding downstream 887308 8890586 ~ 8890834 (+)
G69326 NA non-coding downstream 1363259 9366537 ~ 9376350 (+)
AMCG00014272 tbc1d23 other upstream 517530 7464503 ~ 7482560 (+)
G68848 NA other upstream 583496 7413640 ~ 7416594 (+)
G68830 NA other upstream 650623 7346195 ~ 7349467 (+)
G68475 NA other upstream 3348126 4649200 ~ 4651964 (+)
AMCG00014196 NA other upstream 3868372 4127476 ~ 4131718 (+)
G69406 tgfbrap1,LOC102780916 other downstream 1999780 10003058 ~ 10008648 (+)
AMCG00014345 NA other downstream 2144701 10147979 ~ 10151913 (+)
AMCG00014407 LOC107725344 other downstream 5243031 13246309 ~ 13251732 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 5651960 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 6186286 14189564 ~ 14205014 (+)

Expression


Co-expression Network