Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00014293 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 8160408 ~ 8161280 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0019853 | L-ascorbic acid biosynthetic process | biological_process |
| GO:0032781 | positive regulation of ATPase activity | biological_process |
| GO:0050848 | regulation of calcium-mediated signaling | biological_process |
| GO:0006874 | cellular calcium ion homeostasis | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0005509 | calcium ion binding | molecular_function |
| GO:0030234 | enzyme regulator activity | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| GO:0004341 | gluconolactonase activity | molecular_function |
| id | description |
|---|---|
| K01053 | gnl, RGN; gluconolactonase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00014293 | True | 561 | mRNA | 0.56 | 3 | 8160408 | 8161280 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014294 | NA | coding | upstream | 28615 | 8128204 ~ 8131793 (+) |
| AMCG00014292 | NA | coding | upstream | 33313 | 8120375 ~ 8127095 (+) |
| AMCG00014290 | NA | coding | upstream | 157130 | 8000090 ~ 8003278 (+) |
| AMCG00014289 | tspan7,tspan7b,LOC107704418,LOC107745974,LOC107593043,LOC107586946 | coding | upstream | 305057 | 7845556 ~ 7855351 (+) |
| AMCG00014288 | NA | coding | upstream | 365026 | 7783729 ~ 7795382 (+) |
| AMCG00014299 | slc9a7,LOC107673530 | coding | downstream | 43542 | 8204822 ~ 8250935 (+) |
| AMCG00014306 | cyfip1 | coding | downstream | 102156 | 8263436 ~ 8321739 (+) |
| AMCG00014307 | LOC103356925 | coding | downstream | 181721 | 8343001 ~ 8382284 (+) |
| AMCG00014308 | herc2,LOC102311645,LOC101466252,LOC102196790 | coding | downstream | 224885 | 8386165 ~ 8401359 (+) |
| AMCG00014309 | oca2,LOC107716962 | coding | downstream | 317702 | 8478982 ~ 8507687 (+) |
| G69023 | NA | non-coding | upstream | 24198 | 8133288 ~ 8136210 (+) |
| G69006 | NA | non-coding | upstream | 145405 | 8014744 ~ 8015003 (+) |
| G68982 | NA | non-coding | upstream | 285666 | 7874527 ~ 7874742 (+) |
| G68904 | NA | non-coding | upstream | 534004 | 7625988 ~ 7626404 (+) |
| G68771 | NA | non-coding | upstream | 1102089 | 7056707 ~ 7058319 (+) |
| G69206 | NA | non-coding | downstream | 573043 | 8734323 ~ 8735939 (+) |
| G69232 | NA | non-coding | downstream | 729306 | 8890586 ~ 8890834 (+) |
| G69326 | NA | non-coding | downstream | 1205257 | 9366537 ~ 9376350 (+) |
| G69384 | NA | non-coding | downstream | 1740170 | 9901450 ~ 9910048 (+) |
| G69400 | NA | non-coding | downstream | 1813144 | 9974424 ~ 10028351 (+) |
| AMCG00014272 | tbc1d23 | other | upstream | 677848 | 7464503 ~ 7482560 (+) |
| G68848 | NA | other | upstream | 743814 | 7413640 ~ 7416594 (+) |
| G68830 | NA | other | upstream | 810941 | 7346195 ~ 7349467 (+) |
| G68475 | NA | other | upstream | 3508444 | 4649200 ~ 4651964 (+) |
| AMCG00014196 | NA | other | upstream | 4028690 | 4127476 ~ 4131718 (+) |
| G69406 | tgfbrap1,LOC102780916 | other | downstream | 1841778 | 10003058 ~ 10008648 (+) |
| AMCG00014345 | NA | other | downstream | 1986699 | 10147979 ~ 10151913 (+) |
| AMCG00014407 | LOC107725344 | other | downstream | 5085029 | 13246309 ~ 13251732 (+) |
| AMCG00014423 | pou2f1b,LOC107748141 | other | downstream | 5493958 | 13655238 ~ 13689188 (+) |
| AMCG00014456 | NA | other | downstream | 6028284 | 14189564 ~ 14205014 (+) |
