AMCG00014295


Basic Information

Item Value
gene id AMCG00014295
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 8148387 ~ 8155403 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014295
GGAGGCCAAACCCGCCACAGAAAGTTCAGCCGCAAACTCCACAGCGCCGGGGACTCGTGCTTTCTTCTCGGGGGGCGCATTTCCCGCAGGTCGTGTTGCCCGGGCCGGTTTCTTTCTCCCGGCGATGGCGTGCGCCGCAGCCCCACGCACTGTGCTCTTCTCCTGTATCCGAGATCGCGGTGTCGTCTACGGTTTCGGGAGCCCTAAGCTAGGTGTGCAGCCTGGCGCGCCCCatgctgtttttaaatagcAAACCTGCCCCCAGCAGCGCAGTCCGAGCCGGAGACGAGCAGCTGCAGCCCGGCGACTGCGGACCGTGACGTCAGCGAGGAGCCTgCGGAATTTGgagaaacataaattaaaaaatgacttcCATGGAGTCATCAACAACCAGTAAGGGGTCTCTGAGGAACCTGCCCACGGACAGCTGGATGTCTCATTTACCAGACAGTCTTTGGGACGTGCCTCTGTACAACTTGGCAATTCCagGCAGCCACAACACCATCACTTACTGTCTGGACAAAAACAACAGATCCCCAGTGGATGTCACACAGCCAGACATGTTAAAACAGCTGGACAAAATTATGAAGCCTCTTATTCGCCCGTTTTTGTACAAGTGGGCTATAACACAGGAGTCCAGTGTGAAGGAGCAGCTCGATGCTGGGGTGAGGTATTGTGATCTGAGGATTGCTCACCGGCCGAACGACAACTCCTGTGACCTATACTTCTACCACGGCGTTTACACCACTGTCACTGTGGAGgCGGTCCTGAAGGAGATCCGAGAGTGGCTGGACGTGCATCCAAAAGAGGTTGTGATCTTGTCCTTCAGCCACTTCCTTGCACTCAACCAAGAGCTCCACAGCCATCTGATTGACTCCATAAAGAGCATATTCGTCTCCAAACTGTGTCCAAAAATGGAGACGGTTACACTGAGAAACTTTTGGCACTTAGGATACCAAGTAATAATCTCCTACGAACACCACATCATAAATTGCCATGATGAACTCTGGCCACACATCCCTTACTGGTGGGCCAACAAGTGTGAAGCTGAGGCGCTCATCGAGGAATTTGAAAGGAGGAAACAGAACGGCCGTCCAGCAGGGTTTTTTGTTGCAGGTATAAACCTGACCGAGGACCTCAAGTACATCTGTTCCCACCCGACAAAGTCTCTGAAAGACATGGTGATGTCCACATACCCGGTGCTGCTGGAATGGGTGGAGAACCAGTGTCCCGGGTCTAGCAGACACTCCATCAACATCATCGCTGGGGACTTTGTGAAGGAGGGCCATTTGGTACCAGCCGTGCTTGCGCTGAACGAAGCTCTGCTGAACTGGACGTCCTGATGCTACGCTGAGGGAACGCAAACACCTCtgggaataaaaacaacagaaaaaacaaactatgcAATAGAATAAAACAACTCATGGACAAAAATAGCACTTTACCTATTGAAGGAAGCAAAACAACAGGTCAGATTACAGTATGTGACTTGATATTCAGCGACTCTGGAAAAGAAGGGAGAAAACAACCATTCTAGAAGAATCGTGGACAGTGATTGTTCATAGAGAGTGACCGCTTAATCCGTTCAAATTTGTATCTTTTCTTGTTGAACACAGTCTCCAAAGCTAATGTTTCACGGGGGCTGTAACACATAAATCCAGGGAAACCAAGACTTGCAGAGGTTGTGTGGGACAACGGCAGGTCCCAGCTTCACACTGAGCTACTCACACATCtctttaagaaaatgtacaatgtaaaAACGGAAAAAGGCCATCCAGTCCAGCAAGTCTTCATAGAGTGGCCCCAGCAGATCCCAAAGTTTTCACCAGCTGTGGTTTTGAAGGATCTTAATGAATTCGTAGCATCACATCTCAGAGTACTGTACAAGTTATCTTAGAACGGGGCACAGCAAAAGTACAAAATGATGAattaaaaccacaagaaaaacattattttgcatgacGTTAATAACCCATAGATCAGTTCCAGCGGTTACACACAACTTATATAACGTGCAATAAGATGTAAATGTCTTCCCAAACCTGTCCAACTCTCTGGAGGAAAGATAATGTACCTCTTGTCTTTAGCATGGTGCCTGAGGCCAGATTGCTTGCATGAGACCGCAAGTCAGCGTTTTGCTGCCTTTGTGGATGTTAACCCCTCTATAGTGTGTTTTGAAGAAGTGCATGATTGCCTGATAATGAAGCACCCCTCAAAATCTATCCCTgtaattcttatttatttatacatttatttattccaaaaaTAATGACTGGTGGTAGACTCTCACTTTAAATATTGGTCTACAAATCCTTTCTCTCTGTTATACTGAATTACTTCTTGAGAGACTATTGCTCTGTCTGCCATTCTAGATATAGTTTGGAAATAGTTTGCATCCTTGCAGAGATAAATTCAGTCAATCCAAAATGGTTTAGTAGGCCTTTCGCTAACAAATCTGTCCCTTTTATCATACTCTATGGCCACGCATTATAATGGGCACCAGTTCTTAATggattgatgtatgaatacttgaagcacttcatctgagtttgTCTGTTAGCCACGTGTATACCAAGCTTACAGTGAGGGATAGGCTTACAGACTAGAGTGTGGGGTTAGTGTTTATACATCAGAGCTCAGTGGATGTGCACGcggcattcaaatatttttcctgtaaGATTCACCCATTCATTAAGAACAACTccccattattgtaaagcatTACCTAATCATCTCCTCTCCctttaaatatatgcaataaTGTAAACCATAAGCATCTCCCAAGCAAGCTAGGAAAAGAAGTGGTGATGATTTGAAATATTACCATACAGTGTTACCAAGTGACATTGTAAAGCTCACCAAGACTTGTTACTCACAGGTAATTCAGATCTTTCATGTATATTGAAGCCCTCAAAGGCCACAATGAAAGTTCACAAGGATGATATTTTGCTTGTGTACGACAGGAATCCACAAAACCACACCTTGTGTTTTGTGCAGGGAAATAGGTTATTACATCACATATTGCTATGTTCACATTGTTATAAACCTTATCATTACCATTGCTAATAATATTGATTAGTATGTATCAGGGTTGTTGTTCCTTTCTATCGGGATATATGAGAGACAGGCACTGGGCCATGTTTACAAAGCAACGAGCACTTAACCTCGGTAGATAAAATTGTTTGAAATAAAGTCTCGggaattgtgttgtgttggcATTGTGCCAAATGCATTGTGAATACATACAGTTGCATCTGTATTTATACTAGTTATTCtggtaattaaattattcaagaAGGAACACATTGGGCTCTGGGTTTGATTGTGTTGTTCACTGGAGTTCTTCCCTGTTGAATGAAATACTCTTACTGACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014295 True 3374 mRNA 0.44 7 8148387 8155403

Neighbor

gene id symbol gene type direction distance location
AMCG00014296 NA coding downstream 1379 8142189 ~ 8147008 (-)
AMCG00014291 LOC107586940 coding downstream 88369 8020985 ~ 8060018 (-)
AMCG00014286 NA coding downstream 365385 7752906 ~ 7783002 (-)
AMCG00014287 NA coding downstream 396522 7731014 ~ 7751865 (-)
AMCG00014284 NA coding downstream 473129 7668553 ~ 7675258 (-)
AMCG00014300 LOC107585190 coding upstream 10839 8166242 ~ 8186240 (-)
AMCG00014301 rp2,LOC107753404,LOC107711097,LOC107685300 coding upstream 33620 8189023 ~ 8197625 (-)
AMCG00014302 LOC107582727 coding upstream 104324 8259727 ~ 8260980 (-)
AMCG00014303 NA coding upstream 149128 8304531 ~ 8305181 (-)
AMCG00014305 nipa2 coding upstream 167031 8322434 ~ 8326420 (-)
G68981 NA non-coding downstream 274029 7874153 ~ 7874358 (-)
G68905 NA non-coding downstream 522012 7625985 ~ 7626375 (-)
G68875 NA non-coding downstream 682725 7465409 ~ 7465662 (-)
G68874 NA non-coding downstream 688498 7455978 ~ 7459889 (-)
G68867 NA non-coding downstream 707215 7440500 ~ 7441172 (-)
G69086 NA non-coding upstream 71091 8226494 ~ 8250561 (-)
G69233 NA non-coding upstream 735153 8890556 ~ 8890839 (-)
G69250 NA non-coding upstream 843023 8998426 ~ 8998626 (-)
G69352 dcaf6 non-coding upstream 1194385 9349788 ~ 9355238 (-)
G69372 NA non-coding upstream 1434421 9589824 ~ 9590081 (-)
AMCG00014297 NA other downstream 9261 8134903 ~ 8139126 (-)
AMCG00014278 NA other downstream 725096 7413729 ~ 7423291 (-)
AMCG00014276 LOC106575771,LOC106574874,LOC107705522,LOC107584803,LOC105911816,LOC105019730 other downstream 736497 7402152 ~ 7411890 (-)
AMCG00014271 NA other downstream 761403 7378088 ~ 7386984 (-)
AMCG00014241 NA other downstream 2040029 6059489 ~ 6108358 (-)
AMCG00014298 NA other upstream 529 8155932 ~ 8158590 (-)
G69156 LOC107673457,LOC105895139,LOC107711008,LOC106521848,LOC107716961,LOC101064050,LOC103356925 other upstream 227882 8383285 ~ 8384224 (-)
AMCG00014328 mpc2,LOC107673680,LOC107695492 other upstream 1149836 9305239 ~ 9317167 (-)
AMCG00014340 NA other upstream 1845731 10001134 ~ 10017751 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other upstream 1902694 10058097 ~ 10061230 (-)

Expression


Co-expression Network