AMCG00014304


Basic Information

Item Value
gene id AMCG00014304
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 8330056 ~ 8334452 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014304
CGCTTCCGCATCACCAATGTGCAGAAGTGTCCCTCTTGTCGTGTCTGATGTTATTGAAATGAATTGAACATTTATGTCAAGTAAACTAACAGACAATGTTTTAGATCGTTAGGTATCTTTCTAACACTTCAGTTCGTTGGGTTGTTTGCGGAAGGCATGATGTTACATTAAGGCTGTTATGCCACAAgacaagttttaaaatgactttagaGCTGAAAGAAAGTCCGTTGCTGTGTATTGGTATAGGTATAGCGGTGGTGTCCAGTTTAATCAATGGATCGACGTTTGTGTTGCAGAGAAAAGGCATTTTACAGGCTCGGAAGAGAGGTGCCTCATATTTGACTGAATACATGTGGTGGAGTGGGACTCTCTCCATGATCCTGGGTCAGATAGGGAATTTCTTGGCATATAATGCAGCTCCTGCTGTCTTGGTTACGCCACTTGGAGCTCTTGGTGTGCCTTTTGGGTCTCTCTTGGCTTCCTATATACTGCAGGAAAACCTTAATCTTCTGGGAAAGCTGGGGTGCTTGTTAAGCTGTATAGGCTCTGTGGTGTTAATTATTCACGCCCCAAAGTCAGACCATGTGACCTCCAGGGCAGAGCTCGAGGAAAAGCTGGGAGATCCAGTGTTCTTGTCCTACCTCTTGGTGGTTCTCCTGCTGCTCCTCGTGCTGATCTTCTGGCTGGCCCCGGCCTACGGAGCCTCCAACATCATGGTCTACATCAGCATCTGCTCCCTGCTGGGCAGTTTCACCGTGCCAAGCAGCAAGGGCCTGGGACTGGTGGTGCAGGACGTGTTTGGCGGGGGCTCCTCCAGCAGCAGAGCGCTGTACCTGTTCCTGGGGCTGCTGGCGACCCTGGGAGTCAGTGTCCTCCTGCAGTTCACCTTCATCAACAGAGCCCTGGAGCGCTTCGACTCCAACACGTTCGCCGCCATTTACTACGTGACCTTCACCAGCACGGTCATCCTGGCCTCGGCCGTCCTGTTCCGGGAGTGGGGGATGGTGGGCGCCGTGGACGGCCTGGGCATGCTGTGTGGGTTCACCACCGTGGCTGTGGGCGTCTTCCTCCTGCAGGTCTTCCAGGATGCCAGCCTCAATGGGAAAGGCGTGAAAGCCCCAATCAAGGAAGACTAGGTCTTCATCCTAGCAATCCTCTCCTTGATGATTCATATGAAAATGGGACACTTGACAATTCTAAATGTGGGAAGTTTACTGCAGATcctaaaatgcatttgttagaatgtatttcaccctttatttatttttaatgaacctCAATCGTGCGTGAgggtgtgtttaaaataaattacagattcTAGTTGCTAAAGCGTaagctgtaaattaaaaaacagatgaaTTCCCACGCATATAATGATCTGGCCAATGTGCCTCCATGCCCAGATGAACGCATAGACGCTGGGTTTGGTTGTTGCCACTCTCTGTCATACTAGAACGCCTTGTCGGAATTTCACCTGTACTTTCTGCAGCCTAGTTCTACTGCAGGACAGGCTCTGTTTATTCTCTGCTGTGGCCAGCGTCGAAGCTTCCTTTCACTCACTAATCCCAGTAAGCAAATATAGGCAAATAATGCTGTTTAGCTGAGCTTCACACAGCTGAGAATGGGAACAGCTTAAGCTTGTATGGTGCAATATTAATcctggttatttattttaagatgttttccagctttaaaaaaaaacattgaattgaaATAATGCCAGAAGTTAGAGGGTTGGGCTGCTTAAATAGTCTGCCAAGCCTGTATGTTTCGCCTTCATTTACCTCGAGGAACTCAAAGCAAAAACTCAGGTACTTCGGTAATTTTTACATCTGCTGTAATGGTTCATATGCCTAAGGGCAGTTAGAGAACACGGATATATGCTTATCAGTTGTGTGACTGCAGCACAATACaggaataatttatttagttttcataaAGATGTATGTCTGgattgatattttaatgtatttaataagatCAAAGGTTACTTACATGTacttattgtaaaataaaataaactctgttcttctttgttttctaataaaataCTACTGAATGGATAAAATCTGTATAATCATCCAATATTGACTGTATTCAAAGGCTAACCCAGTTGATAAGGCAACATGTGACTGCTGGTATAGCTACGTTAGTATGTCTGttgacatttatatataatgaagttgttttgcattttggtgCTTGAATACACACTTTGCATCAGCTGACACTTGTGTGCTTTTAGAAACAATTATTCtaaaaacatgtacaatgaTTTGCTGATTCCAGATTCTTTTGCTTGATGACAGGAGCAAGTGAATTTCTAtttagagagaaaaataagacgtttgagatttcagtttttttcaatttacagGACAGCTGATAGCATTCACACTTGAAGTTTGTTGTTTACATTGCAAAAGGCAAAACAGCAAGGCATtattaacacacatttttatagatGTATAACAAGCATTTAACCAATTACTAAA

Function

GO: NA

KEGG:

id description
K19364 NIPA1, SLC57A1; magnesium transporter NIPA1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014304 True 2495 mRNA 0.43 5 8330056 8334452

Neighbor

gene id symbol gene type direction distance location
AMCG00014305 nipa2 coding downstream 3636 8322434 ~ 8326420 (-)
AMCG00014303 NA coding downstream 24875 8304531 ~ 8305181 (-)
AMCG00014302 LOC107582727 coding downstream 69076 8259727 ~ 8260980 (-)
AMCG00014301 rp2,LOC107753404,LOC107711097,LOC107685300 coding downstream 132431 8189023 ~ 8197625 (-)
AMCG00014300 LOC107585190 coding downstream 143816 8166242 ~ 8186240 (-)
AMCG00014312 NA coding upstream 202485 8536937 ~ 8539049 (-)
AMCG00014310 gabrg3,LOC107711006 coding upstream 266710 8601162 ~ 8615001 (-)
AMCG00014311 NA coding upstream 397126 8731578 ~ 8758181 (-)
AMCG00014317 cnga3a,LOC108441138 coding upstream 695653 9030105 ~ 9040045 (-)
AMCG00014319 NA coding upstream 712852 9047304 ~ 9050642 (-)
G69086 NA non-coding downstream 79495 8226494 ~ 8250561 (-)
G68981 NA non-coding downstream 455698 7874153 ~ 7874358 (-)
G68905 NA non-coding downstream 703681 7625985 ~ 7626375 (-)
G68875 NA non-coding downstream 864394 7465409 ~ 7465662 (-)
G68874 NA non-coding downstream 870167 7455978 ~ 7459889 (-)
G69233 NA non-coding upstream 556104 8890556 ~ 8890839 (-)
G69250 NA non-coding upstream 663974 8998426 ~ 8998626 (-)
G69352 dcaf6 non-coding upstream 1015336 9349788 ~ 9355238 (-)
G69372 NA non-coding upstream 1255372 9589824 ~ 9590081 (-)
G69373 NA non-coding upstream 1256724 9591176 ~ 9591381 (-)
AMCG00014298 NA other downstream 171466 8155932 ~ 8158590 (-)
AMCG00014297 NA other downstream 190930 8134903 ~ 8139126 (-)
AMCG00014278 NA other downstream 906765 7413729 ~ 7423291 (-)
AMCG00014276 LOC106575771,LOC106574874,LOC107705522,LOC107584803,LOC105911816,LOC105019730 other downstream 918166 7402152 ~ 7411890 (-)
AMCG00014271 NA other downstream 943072 7378088 ~ 7386984 (-)
G69156 LOC107673457,LOC105895139,LOC107711008,LOC106521848,LOC107716961,LOC101064050,LOC103356925 other upstream 48833 8383285 ~ 8384224 (-)
AMCG00014328 mpc2,LOC107673680,LOC107695492 other upstream 970787 9305239 ~ 9317167 (-)
AMCG00014340 NA other upstream 1666682 10001134 ~ 10017751 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other upstream 1723645 10058097 ~ 10061230 (-)
G69537 NA other upstream 2462264 10796716 ~ 10798147 (-)

Expression


Co-expression Network