AMCG00014318


Basic Information

Item Value
gene id AMCG00014318
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 9131415 ~ 9135387 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014318
TGCATGTACAGGCGGCAGGCAAGATCAGATGTGCAGGATATTGCATGGGAcatgtacaaataaatgcatgctgaaataaatgaaaggctcccccaatcacggcATCCCGCACCTCCTGTGACGGAGCGGGGTTAACCTTCAACCCCGGAAACGACCATGCTGTGAGTCTGACCCCCAAAGCAATTGTCCTCAGCCTGCAACACACAGCTGCCTTACAGAGACAAGTAGAGAGACGTGGGGTTTCATCTTTAATACAGCAATGCCAACTGTCTCCACACGTGTCcaggcacacgcacacacattcaGAGCAGAGGCATTTTTACTGTGCATTAACCTGCACACTGATCTGAGGTCTGGTTGATTATTAACTCAGATGCAGTTTGGCCTTGTCAAGTCATTCTTCACCACTGCACAGCAAGGAATAGGCAAGAGGCTTTCTTTCTCCAGAGTTGGCACCATGGCCCAGAAGCTGCTGCTGGTGGATGCAGACTGTGGGATAGATGACGCCCAGGCTATAATGATGGCCTTGGCGGCCCCCCACGTGCGCATCCTGGGAATCACCTGCTGCTTTGGAAACACGTCGGTGGAGAATGTGTGCAGGAACACGCTGCGGGTCCTCAACGTGTGTCAGAGGACTGAGGTCCCCGTGTTCTGTGGCGCAGCCTGCCCGCTAGTAGGGACATCTGACCTTCTCACCAGCCACTTTGGGACGGACGGACTGGGAGACAGGCCAGAGGATAGCGACCCCGAGCTGTGGAGGACACAGATCCAGAGAGAGCATGCTGTCAATGCCATGATTGAGATGGTTTCCCAGCACAGGGGCCAGGTCTCTCTTGTTGCACTCGGCCCCCTGACTAACCTGGCTCTGGCTGTGCGAATGGATCCCACTTTCCCACAGAAACTTAAGGATCTCTTCATAATGGGAGGAAACATGGAAGGTAAAGGCAACAGGACAGTGTGCGGAGAATTCAACTTCGTGATGGATCCGGAGGCAGCGTATGTTGTGCTGGAGGAGTTCTCTTGTCCCACTTATATTGCAACATGGGACTTTACATGCCGTAATAAACTGCCTTGGGAATTCTTTGACGAATGGGTCAACCAAGATACCGCCGCTGCTGCCTTCATGAAGAGAATAACATCCCAGACTTATTGCAGAGATAAAACCACAAAGAAAGACGTGCTTTTTGGACCTGGATTCGTCTCCTACGATTCCTACGCCATGGCCGCTGCCATCGACAGCAGTATAATGACAAAGAACATGGAGTGCTCCGTCCGCGTGGAGCTACAGGGAAAACTCACCAGAGGGATGATGGCCCTCGATCCGGTTAACGTCCTGGAGAAGAAACGAAAAGCTTTTGTGATGGAGGAGTGCGACATTAACAAATTTAAGCGCCTACTCATGGCTGCTCTTGTGCAAACTTGTACAAAACATTAGAGGATCTCACAGCTGTAGGTTTTAATGTAGAAAAGGTAAATGACAGTGAATGGAGCAGAATGTTAGGTACAGGGATGATTCGACACAGCATGGTTGGCACAGATGTTAGTGTATGTAATGTCACTTCtgttaaatacttaattattcTGTAGCTCTCATATCTGGATGTGTAATTTTAGTACTAATGGTTTATCATTGTCCACAGATACTTTTTGTAATTTCCAGGTCTTgctttgtcatttatttccaaGAATAGCTTTGGAAAACAGTCCATCTTTTAaggtgtgtaaaataaatactatgaCATTCAGGAAGCATCTTTGAATGCAtatttctctgtactttctACTCTTGTCACAGGCAAGTAAAATCATATGCGATCATGCGGAGTATGTGGAAAGTGGTTCTCTCAAGTCTAACGTATAAGACAACACCCATGCAAAAG

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014318 True 1880 mRNA 0.48 6 9131415 9135387

Neighbor

gene id symbol gene type direction distance location
AMCG00014320 NA coding downstream 46202 9061033 ~ 9085213 (-)
AMCG00014319 NA coding downstream 80773 9047304 ~ 9050642 (-)
AMCG00014317 cnga3a,LOC108441138 coding downstream 91370 9030105 ~ 9040045 (-)
AMCG00014311 NA coding downstream 373234 8731578 ~ 8758181 (-)
AMCG00014310 gabrg3,LOC107711006 coding downstream 516414 8601162 ~ 8615001 (-)
AMCG00014326 NA coding upstream 9151 9144538 ~ 9147337 (-)
AMCG00014325 NA coding upstream 81482 9216869 ~ 9228627 (-)
AMCG00014331 NA coding upstream 223460 9358847 ~ 9367036 (-)
AMCG00014333 inpp4a coding upstream 238069 9373456 ~ 9418236 (-)
AMCG00014332 NA coding upstream 331937 9467324 ~ 9472259 (-)
G69250 NA non-coding downstream 132789 8998426 ~ 8998626 (-)
G69233 NA non-coding downstream 240576 8890556 ~ 8890839 (-)
G69086 NA non-coding downstream 880854 8226494 ~ 8250561 (-)
G68981 NA non-coding downstream 1257057 7874153 ~ 7874358 (-)
G68905 NA non-coding downstream 1505040 7625985 ~ 7626375 (-)
G69352 dcaf6 non-coding upstream 214401 9349788 ~ 9355238 (-)
G69372 NA non-coding upstream 454437 9589824 ~ 9590081 (-)
G69373 NA non-coding upstream 455789 9591176 ~ 9591381 (-)
G69382 NA non-coding upstream 759339 9894726 ~ 9895580 (-)
G69391 NA non-coding upstream 765970 9901357 ~ 9912021 (-)
G69156 LOC107673457,LOC105895139,LOC107711008,LOC106521848,LOC107716961,LOC101064050,LOC103356925 other downstream 747191 8383285 ~ 8384224 (-)
AMCG00014298 NA other downstream 972825 8155932 ~ 8158590 (-)
AMCG00014297 NA other downstream 992289 8134903 ~ 8139126 (-)
AMCG00014278 NA other downstream 1708124 7413729 ~ 7423291 (-)
AMCG00014276 LOC106575771,LOC106574874,LOC107705522,LOC107584803,LOC105911816,LOC105019730 other downstream 1719525 7402152 ~ 7411890 (-)
AMCG00014328 mpc2,LOC107673680,LOC107695492 other upstream 169852 9305239 ~ 9317167 (-)
AMCG00014340 NA other upstream 865747 10001134 ~ 10017751 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other upstream 922710 10058097 ~ 10061230 (-)
G69537 NA other upstream 1661329 10796716 ~ 10798147 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other upstream 1989642 11125029 ~ 11137086 (-)

Expression


Co-expression Network