AMCG00014331


Basic Information

Item Value
gene id AMCG00014331
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 9358847 ~ 9367036 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014331
CTGCTGGGCTGGATTTGAATCAGctgataaaggaaaaaaaactttgcaaTGAGGAAACATGGAAAGTTGCCACTGTGACCCCGCGAAAGCACCGGGCTCTTCTTTGCGTGTTTTCTCGCCCTTTTCTTCTCGTCTCAGGGGATGGGAGTGAAGCGGAGGTAGGAACTTTTAAAGCAGAGACCGGGAGGCTCCGGTGCACACAAAGGGATCGGGCAGTGTTTTATCTGCGTCCCATGGCTGGAAGTCGGCGTGAGACAGGGGTTTTAGATCAGTTGCCAAGCATGTCTCCCCTTGCTCCACTTCTCCGTCTCCCACAATGAACAGCTGCAGCAATGGGACGTCTCCCACGAACGACACGGCCGGGGGTGGCAGTGGGGTCGTGGTGGTCGAGTCCATCTTTGCCGTCGCCATCACCCTGCTCGTCTTCTTCGGCAACCTGCTGATCGTGGTGACGTTGTACAAGAAGCCCTATCTGCTGACGCCCAGCAACAAGTTTGTCTTCAGCCTGACTCTGTCGAACCTGCTGCTGTCCGTGCTGGTGCTGCCCTTCGTCGTTGCCAGCTCGGTGCGGCGCGAGTGGATCTTCGGGGTGGTGTGGTGCAACTTCACCGCCCTGCTGTACCTGCTCATCAGCTCTGCCAGCATGCTCACCCTGGGCGCCATCGCCATTGACAGGTATTATGCTGTTCTCTACCCCATGGTTTACCCCATGAAGATCACTGGCAACCGTGCAGTGGTGGCTATTGTCTACGTGTGGCTACATGCCCTGTTGGGCTGCCTGCCGCCCTTCTTTGGCTGGTCCACCTTTGAGTTTGATCAATACAAATGGATGTGCACAGCTGCCTGGCACAAGGATGTGAGCTACACGGCTTTCTGGATCTCCTGGTGCACGTTGCTCCCCTTCTTGGCCATGACAGTCTGCTACGGATTTATCTTCAGGGTGGCACGGATCAAAGCCCGTAAGATCCACTGCAGGACGGTGGTCGTGGCCCAGGAAGAGACCTCTTCGCAGAAGAACGGCCGTAAGAACTCCAACACTTCTACCTCTTCCAACGGCAGTCGCAGAAGCAGCGGCCTGGTCTATTCGGGAAACCAGTGCAAGGCCTTCGTGACTATTCTGGTGGTACTGGGGGCCTTCGTGGTGACCTGGGGCCCCTATGTGGCCGTCATCAGCACTGAAACCCTGTGGGGGAAAGGTAGCGTCTCTCCTGGCCTGGAGACCCTGGTGACCTGGCTATCCTTCACAAGTGCCATCTGCCACCCTCTCATCTATGGACTGTGGAACAAGACTGTGCGCAAAGAGCTGCTGGGGATGTGCTTCGGAGACCGCTATTACAGGGAGTCCTTCGTCACTCGCCACAGGACCTCGAGGCTGGTCAGCATCTCGACCCGCATCACTGAGGGCAGTGCAGTGTTTGCCGTGCTGATGGTGTTGTGTATCGCAGATCTGGGGATGTCTCCACATCTGACCGCAATACTGGCAGGAGGAGGACAGATCCTGGGACACGGCAGCAGCACTGGAGACACCGGCTTCAGCTTTTCTCAAGACTCAGGTACCGACCTCATGTTGCTGGATGACTTCACGTCAGACGGCACGCATGCCTCGCACCACGGGGGGGCCTCCGGCAAGCGGCGGAGCTCGGTGACCTTTGAGGACCAGCTGGAGCAACACTCCAAAGaaaattcCACTCCTTCCACAGTCCAAGTGAAGGCAGAGATTCATAAGTCCCTGGACAGCTACGCCTCCTGCCTTGCCAAAGCCATCGAGACTGATGCCAAGCTCCTGTTGTTTGGGGACGAGACCCTGCCGGGCAGCCTGTTTGCGTTGCGGACCGCTCCGGGCATCACAGGGGGCACGCAGAGAGGGCCCAGGTACCTCAATGGGCAGAGACTGAGGCTGGAGAGCATCGATGAAGGAATAGTAAATGACGGGAATGAGGAGGACGAAGATGAAATCGAAGAAATCTGTGCCTGAAATTAATCACTATTATGAGTTTCCTCTGTGGAGATTTCCGTGTGCTGTAGAGGTGCTCAGATCCTGAATCATCTTTGTAGTTTTGTtacatgaggaaaataaaacatttgaaaccgAGACTATAGTTGGACGTGATGTAAGCCcgtgtgtgaaaatgtgtgtgaaattcTCGCCCTCCACTCATAAAATCAGTAAGTGCAGATCTTACTATTGAACAAAGTACTTTCATGTATTCATACATGAAAGTACTTTCATGTATTCATACATGTGGTAGAAGTTTCTATTTTGGAGAATCATATGCAGTATTTTTAACTTCCAGAACAACAAGTGTTCAAGTGAAATATGCAACTACATCATGTGTATATTGAAGCTTAAAGTAGAGCATAAGGTACTACcattttaaaccacaaattAGTACGGTTGCCATGAATATATAAGGAAATATATTATCCATGCAGtggtgttgaaaatgtaagaCCAAGTTGAATTTTATCTGTAGAACCTGTGAAGTGTGTCGGTACGTTTGCACTTGAGGATGCAGTATTCAGCGTTTTGCTCCTTCGGACACTTTCAATTGCCTCATAGAGCCGAGGTCATCAGTTCATCCAGGAATTCGAAAGGAAGCAGGTCAGCATTCCAAATTCTTCAAAGGCCGACCAAAATATTGGGAATTTGTACTTCTTTCCATTTACGGTTCCCAACAAATGATTACTGTTTAAGCTTTAATAACCACAGTGTTTTcggttttaaaataagtttcctGGATCCTGTGTGCAAACCGGTATCTTACTAGGCGTAGAAGACTCCATTGGGGTCTTGTCCTATCGTGGTTACTGATGCCACATGCTGTAAAGTACTGTATTTGAGTAATATAGTATTCATCggatttattaaacatttgttttttctggaaactgctgaaatgaaatgttacTGCATCTTGGGACTGAGAAACGGAAGCAGTGAGAGGCTTCAATCAAGTAGGTCATGTAAACTATTCTagttttgtgcttttaaaagcagtattttaatattgttagtctgttttcccctca

Function

GO: NA

KEGG:

id description
K08439 GPR161; G protein-coupled receptor 161

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014331 True 3030 mRNA 0.50 6 9358847 9367036

Neighbor

gene id symbol gene type direction distance location
AMCG00014325 NA coding downstream 130220 9216869 ~ 9228627 (-)
AMCG00014326 NA coding downstream 211510 9144538 ~ 9147337 (-)
AMCG00014318 NA coding downstream 223460 9131415 ~ 9135387 (-)
AMCG00014320 NA coding downstream 273634 9061033 ~ 9085213 (-)
AMCG00014319 NA coding downstream 308205 9047304 ~ 9050642 (-)
AMCG00014333 inpp4a coding upstream 6420 9373456 ~ 9418236 (-)
AMCG00014332 NA coding upstream 100288 9467324 ~ 9472259 (-)
AMCG00014341 fhl2,fhl2a,LOC107716797,LOC107676452,LOC107688730 coding upstream 660616 10027652 ~ 10043566 (-)
AMCG00014346 uxs1,LOC107721615,LOC107551074,LOC107676432 coding upstream 825593 10192629 ~ 10197751 (-)
AMCG00014348 NA coding upstream 873970 10241006 ~ 10256375 (-)
G69352 dcaf6 non-coding downstream 3609 9349788 ~ 9355238 (-)
G69250 NA non-coding downstream 360221 8998426 ~ 8998626 (-)
G69233 NA non-coding downstream 468008 8890556 ~ 8890839 (-)
G69086 NA non-coding downstream 1108286 8226494 ~ 8250561 (-)
G68981 NA non-coding downstream 1484489 7874153 ~ 7874358 (-)
G69372 NA non-coding upstream 222788 9589824 ~ 9590081 (-)
G69373 NA non-coding upstream 224140 9591176 ~ 9591381 (-)
G69382 NA non-coding upstream 527690 9894726 ~ 9895580 (-)
G69391 NA non-coding upstream 534321 9901357 ~ 9912021 (-)
G69394 NA non-coding upstream 549809 9916845 ~ 9917335 (-)
AMCG00014328 mpc2,LOC107673680,LOC107695492 other downstream 41680 9305239 ~ 9317167 (-)
G69156 LOC107673457,LOC105895139,LOC107711008,LOC106521848,LOC107716961,LOC101064050,LOC103356925 other downstream 974623 8383285 ~ 8384224 (-)
AMCG00014298 NA other downstream 1200257 8155932 ~ 8158590 (-)
AMCG00014297 NA other downstream 1219721 8134903 ~ 8139126 (-)
AMCG00014278 NA other downstream 1935556 7413729 ~ 7423291 (-)
AMCG00014340 NA other upstream 634098 10001134 ~ 10017751 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other upstream 691061 10058097 ~ 10061230 (-)
G69537 NA other upstream 1429680 10796716 ~ 10798147 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other upstream 1757993 11125029 ~ 11137086 (-)
AMCG00014374 NA other upstream 2292975 11660011 ~ 11667537 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_037282 gpr161 coding NC_007120.7 CM002893.2 34148714 ~ 34162374 (+)
grasscarp (Ctenopharyngodon idella) CI01000024_05125128_05131366 NA coding CI01000024 null 5125123 ~ 5131366 (-)